Pairwise Alignments

Query, 315 a.a., Efflux ABC transporter, ATP-binding protein from Variovorax sp. SCN45

Subject, 312 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

 Score =  203 bits (517), Expect = 4e-57
 Identities = 113/314 (35%), Positives = 186/314 (59%), Gaps = 20/314 (6%)

Query: 3   AISFQSVSKTYPPSKQQKAQGKQGLKAVDEVSFQIEPGEFFGLLGPNGAGKTSLISMLAG 62
           A+  + + KTY          K G++AV  +S  +E G+FF LLGPNGAGK++ I +++ 
Sbjct: 7   ALVLEGLKKTY----------KGGVEAVKGISLTVEQGDFFALLGPNGAGKSTTIGIISS 56

Query: 63  LSRPTSGTVSVHGFDVQRDYAEARRQLGIVPQELVFDPFFNVRESLRIQSGYFGIKNNEA 122
           L + T+G+V V  FD+ +   EA+  +G+VPQE  F+ F  V + +  Q+GY+G+  + A
Sbjct: 57  LVQKTAGSVQVFDFDIDKQLEEAKLCIGLVPQEFNFNQFETVLQIVVNQAGYYGVPKHIA 116

Query: 123 W--IDELLQSLGLADKATANMRQLSGGMKRRVLVAQALVHKPPVIVLDEPTAGVDVELRQ 180
               ++ L  L L DK  +  R LSGGMKRR+++A+AL+H+P +++LDEPTAGVD+ELR+
Sbjct: 117 LERAEKYLSQLDLWDKRNSQSRTLSGGMKRRLMIARALMHEPKLLILDEPTAGVDIELRR 176

Query: 181 TLWQFVARLNKQGSTVLLTTHYLEEAEALCSRIAMLKLGKVIALARTGDLLKAASSNVLR 240
           ++W+F+ ++N+QG T++LTTHYLEEAE LC  I ++  G ++       LL  +  N+  
Sbjct: 177 SMWEFLKQINQQGVTIILTTHYLEEAEMLCRNIGIIDKGVLVECTSMKALL--SKLNLET 234

Query: 241 FKTDAMLPWEIAKN-----ARITG-RIVQLPAQNAHEVEQLLAAIREAGVAVEDVEMRKA 294
           F  D     ++A        R+T    +++     H +  +   +  A V V  +  +  
Sbjct: 235 FILDLRRDIDVAPTLNGMVCRLTDPHTLEVDVAKDHNLNDVFTQLTAAKVEVLSMRNKSN 294

Query: 295 DLEDVFIDLMAGEQ 308
            LE++F++L+   Q
Sbjct: 295 RLEELFVELVKKTQ 308