Pairwise Alignments

Query, 1585 a.a., Glutamate synthase [NADPH] large chain (EC 1.4.1.13) from Variovorax sp. SCN45

Subject, 494 a.a., rubredoxin from Methanococcus maripaludis S2

 Score =  111 bits (277), Expect = 2e-28
 Identities = 85/287 (29%), Positives = 122/287 (42%), Gaps = 17/287 (5%)

Query: 951  GAANVEVDMPLRDGDSLRSR-------IKQVASGRFGVTAEYLHSADQIQIKMAQGAKPG 1003
            G+A V+  M   +G  L          I +    ++ +T E L   D ++IK+ Q +KPG
Sbjct: 192  GSAAVKTAMCSGEGGMLEESFENAYKYILEYVPNQYSITDENLKKVDAVEIKIGQSSKPG 251

Query: 1004 EGGQLPGGKVTEYIGKQRYAVPGVGLISPPPHHDIYSIEDLAQLIHDLKNTAPHASISVK 1063
             GG LP  KV+E I K R    G  ++SP   HDI + +DL   + +L+  +    I +K
Sbjct: 252  MGGHLPAEKVSEEIAKLRGFKVGQDIVSPSKFHDINNKDDLKNKVSNLREKSGGKPIGIK 311

Query: 1064 LVSEIGVGTIAAGV---AKCKSDHVVIAGHDGGTGASPWSSIKHAGSPWEIGLAETQQTL 1120
                I  G I A +      K D + I G  G T ASP         P    L   ++  
Sbjct: 312  ----IAAGDIEADLEVATYAKPDFITIDGRPGATAASPKFIKDSTSVPTIFALYRAREFF 367

Query: 1121 VLNRLRSRIRVQADGQMKTGRDVAIGALLGADEFGFATAPLVVEGCIMMRKCHLNTCPVG 1180
              N + + I +   G ++   D A    +GAD     TA L+   C   R C    CPVG
Sbjct: 368  NKNGI-TDISLVITGGLRISSDFAKAIAIGADAIAIGTAALMATACQQYRICDTGECPVG 426

Query: 1181 VATQDPIL--RKKFSGKPEHVVNYFFFVAEEVRQIMAQLGIRKFDDL 1225
            V TQ P L  R K     + + NY     EE++      G +   DL
Sbjct: 427  VTTQKPELKDRLKIELSAKKLSNYLRVSTEELKTFARLTGNKNIHDL 473