Pairwise Alignments

Query, 369 a.a., 3-dehydroquinate synthase (EC 4.2.3.4) from Variovorax sp. SCN45

Subject, 624 a.a., 3-dehydroquinate synthase (EC 4.2.3.4) from Pseudomonas fluorescens FW300-N2E2

 Score =  155 bits (393), Expect = 2e-42
 Identities = 104/308 (33%), Positives = 159/308 (51%), Gaps = 13/308 (4%)

Query: 55  APLYAKALLAALAGRFRTVHL----LELPDGEVHKNLQTLNLIFDDLLGHGSDRKTVLFA 110
           AP   + + A  A  F  +HL    + +P GE  K+ Q L  ++ D+L HG DR   + A
Sbjct: 285 APHLQEQINAYFASHFPDLHLQAPPIAVPAGESSKDSQVLQRLYTDMLKHGLDRHCHVLA 344

Query: 111 LGGGVVGDMTGFAAASYMRGVPFVQVPTTLLAQVDSSVGGKTAINHPLGKNMIGAFYQPQ 170
           LGGG V D  G+A A++ RG+  +++P+T+LAQ D+ +G K  IN    KN++GAFY   
Sbjct: 345 LGGGAVLDAVGYACATFHRGIRLIRIPSTVLAQNDAGIGVKNGINAFGQKNLLGAFYPAT 404

Query: 171 LVVCDLGTLQTLPPRELSAGLAEVIKYGPIYDMAFFDWIEANIEALTAREPAALAHAVKR 230
            V+ D   L +L  R+  AGLAE +K   I D AFF W+E   +AL   E  A  +A++R
Sbjct: 405 AVINDFQLLTSLTRRDQIAGLAEAVKVALIKDPAFFQWMEQQADALAHFEHGASRYAIRR 464

Query: 231 SCEIK-ALVVGQ-DERETGLRAILNFGHTFGHAIESGLGYGEWLHGEAVGCGMVMAAHLS 288
             E+  A + G  D  E G    L++GH   H +E+ L      HGEAV  GM +    +
Sbjct: 465 CAELHLAHITGAGDPFERGNGRPLDYGHWAAHKLEN-LSQHRLRHGEAVAVGMALDGLYA 523

Query: 289 QRLGGVDAAFVERLTRLIERAGL------PTVGPALGAERYLELMRVDKKSEAGEIRFVV 342
             LG +     ER+  L+ + G        T+  ALG  + L  +   ++   G++   +
Sbjct: 524 NALGLLSDGDTERVLNLLLKLGFCLNPPELTLKDALGRSQVLLGLEEFRQHLGGQLSIPM 583

Query: 343 IDKPGSAV 350
           + + G +V
Sbjct: 584 LSRIGESV 591