Pairwise Alignments

Query, 225 a.a., Type IV pilus biogenesis protein PilO from Variovorax sp. SCN45

Subject, 199 a.a., fimbrial protein from Vibrio cholerae E7946 ATCC 55056

 Score = 87.4 bits (215), Expect = 2e-22
 Identities = 53/190 (27%), Positives = 100/190 (52%), Gaps = 3/190 (1%)

Query: 26  LNPNDPSVWPAVPRYALCLAVTAFVLVALWFVWLTNSNDELEAERGKEVTLKADYQKKVA 85
           L  ++ S WP +P+  + L +   +  A ++ +L    DE+   + +E T+KA  + K  
Sbjct: 10  LELDEISEWPLLPQLVVILLIMLLIQGAGYWFYLMPKQDEIALLKQEEETVKATLRIKAN 69

Query: 86  QAANLDLLKKQREQVQQYVTLLEKQLPSKAEMDALLSDINQAGLGRSLQFELFRPGQVVV 145
           + A L  ++ Q +++++    L +QLP + E+ ++L+ +NQ GL  SL F     G+   
Sbjct: 70  KVAVLPQIQAQLDELKERYDFLLRQLPVQKELASMLASVNQLGLDSSLTFTRIDWGERES 129

Query: 146 KDYYAELPIAVRVTGKYHDMGAFVADVAGLSRIVTLNGVT-ITPQKDKDTLTMDATARTF 204
           +++   LP+ + +TG YHD+G F   +A L RI+  + V      ++  TL     A T+
Sbjct: 130 QEFLYRLPLNIELTGSYHDIGDFSQAIAKLPRIINFDDVDWQRVSQESSTLHFRVRAYTY 189

Query: 205 RYLD--DDER 212
           ++    DDE+
Sbjct: 190 QFKQEVDDEK 199