Pairwise Alignments

Query, 225 a.a., Type IV pilus biogenesis protein PilO from Variovorax sp. SCN45

Subject, 207 a.a., pilus assembly protein, PilO (RefSeq) from Shewanella loihica PV-4

 Score =  107 bits (266), Expect = 2e-28
 Identities = 65/204 (31%), Positives = 109/204 (53%), Gaps = 3/204 (1%)

Query: 22  QFRGLNPNDPSVWPAVPRYALCLAVTAFVLVALWFVWLTNSNDELEAERGKEVTLKADYQ 81
           +F  ++  +   WP   +      +   + VA +F++++++ D L+ E+ KE+TL+ D++
Sbjct: 7   EFNDIDFENIGGWPTQVKVVFASFLAIIIFVAGYFLFVSDAIDVLKREQDKEITLRDDFK 66

Query: 82  KKVAQAANLDLLKKQREQVQQYVTLLEKQLPSKAEMDALLSDINQAGLGRSLQFELFRPG 141
            K   AANL L ++Q   ++     L K LPS+ EM  LL D+        L  +     
Sbjct: 67  AKYQLAANLKLYREQLAVMEVQFAELLKMLPSQNEMPGLLDDLTFVATDSGLGIQSLEWQ 126

Query: 142 QVVVKDYYAELPIAVRVTGKYHDMGAFVADVAGLSRIVTLNGVTITPQKDKDTLTMDATA 201
           + + +D+Y E PI++ VTG YH+MG  V+ VA L RIV+L+   I  + D   L M+  A
Sbjct: 127 EEIQRDFYIEFPISMSVTGNYHEMGHLVSGVAKLPRIVSLHDFVI-KRSDSGELAMEILA 185

Query: 202 RTFRYLDDDERAAQKRAAAPKAKK 225
           +T+R+ +  +    K  AA  AKK
Sbjct: 186 KTYRFKEGAQ--LPKDNAAKGAKK 207