Pairwise Alignments

Query, 803 a.a., Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) from Variovorax sp. SCN45

Subject, 835 a.a., penicillin-binding protein 1A from Vibrio cholerae E7946 ATCC 55056

 Score =  483 bits (1242), Expect = e-140
 Identities = 289/757 (38%), Positives = 430/757 (56%), Gaps = 64/757 (8%)

Query: 41  VLSVLCVVAVALAV------AYPNLPDISELSDYRPKLPLRVFSAEGTLIGEFGEERRNL 94
           V S++C++     +         +LPD++ L D + + P++VFS +G LI +FGE+RR  
Sbjct: 19  VFSLICIILGVTTIFGFYFYVKSDLPDVATLRDVQLQTPMQVFSQDGKLIAQFGEKRRIP 78

Query: 95  TPISAIPKVVKDAVLAAEDSRFYDHGGVDYKGMVRAGLANL-NRVKSQGASTITMQVARN 153
             +  +PK + +AV+A EDSR+Y+H G D  G+ RA  A L +   SQGASTIT Q+ARN
Sbjct: 79  LKLEEMPKELIEAVIATEDSRYYEHYGFDPIGITRAAFAVLASGSASQGASTITQQLARN 138

Query: 154 VYLSSEKTLTRKVYEVLLTFKLEHLLTKDQIFEIYLNQIYLGNRAYGFAAASEAYFGKPL 213
            +LS+EK + RKV E+ +   +E LL+K +I E+YLN+IYLG R+YG  AA++AYFGK +
Sbjct: 139 FFLSNEKKVMRKVKEIFIAIHIEQLLSKQEILELYLNKIYLGYRSYGVGAAAQAYFGKEV 198

Query: 214 QELTIAQAAMLAGLPKAPGANNPVNNPQRARGRQFYVIDRMQEAGFITAEQAAEAKKEEL 273
           ++LT+ + A++AGLPKAP   NP+ + +RA  R+  V+ RM +  +IT  +   A+ E +
Sbjct: 199 KDLTLGEIALIAGLPKAPSTMNPIYSVERATNRRNVVLQRMLDEKYITKAEYDAARAEPV 258

Query: 274 HLRDAADPNRLHAEYVAETVRQLMYAQYG-DSTYTRGLKVYTSLVAADQAAAYKALRKGI 332
             +       L+A YVAE  R  M  +YG ++ YT G+ VYT++ +  Q AA +A    +
Sbjct: 259 LPKYHGAEIELNAPYVAEIARAWMVERYGEEAAYTSGMNVYTTVDSKLQRAANQAAINNL 318

Query: 333 MDYERRQIYRGPEKFVDLPNDAKDIDEAVDDALSDHPDNGDVMAAVVLKATPKQIDAVRA 392
           + Y+ R  YRG EK +   N        + + LS+ P  GD+  A VL    K       
Sbjct: 319 LAYDERHGYRGAEKELWQVNQPAWSSTQLSEYLSNEPTYGDMFPAAVLSVEEKSAQVWVK 378

Query: 393 NGDPVQITGEGLKPAQSGLSD----KAPPNIKIRRGAVIRVVKTPK------NTWEITQL 442
           +     I  E +  A+  ++D      P +      A  ++   P+        W++TQ+
Sbjct: 379 SYGVQTIAWEDMNWARRFINDDRQGPLPKSANEFLAAGQQIWVRPRTQDGAITAWKLTQV 438

Query: 443 PEVEGAFIAMDPRDGAIKALVGGFDFGKNKFNHVTQAWRQPGSSFKPFIYSAALEKGFTP 502
           P    AF+AM+P +GA+ ALVGGF+F  NKFN  TQ+ RQ GSS KPFIYSAAL KG T 
Sbjct: 439 PNANTAFVAMNPENGAVTALVGGFNFVHNKFNRATQSVRQVGSSIKPFIYSAALNKGLTL 498

Query: 503 ATVINDGPLFFDAGTTGGQPWEPKNYGGGYDGPMSMRTALMKSKNLVSIRILQSIGTRYA 562
           AT+IND P+      + G  W PKN    Y GP  +R  L +SKN++++R+L+ +G    
Sbjct: 499 ATLINDAPI-NQWDESQGTAWRPKNSPPTYTGPTRLRIGLAQSKNVMAVRVLREVGLDET 557

Query: 563 QEWITNFGFDKDKHPAYLPMALGAGSVTPMQMAVGYSVFANGGYRVNPYLVTRITDHKDK 622
           +E++T FGF  D+ P    +ALGAGS+TP+QMA G+SVFAN GY V P+ ++R+ +    
Sbjct: 558 REYLTRFGFKLDQLPRSETIALGAGSLTPVQMAQGFSVFANNGYFVEPFYISRVENPFGN 617

Query: 623 VLVDKQPPL---------LNE----------SLRAIPQRNAFIMDTLLQS---------- 653
           +    +P +         L+E          + + I ++NAF+   +L S          
Sbjct: 618 IEFSAEPKVVCHRECSSELDEFAEQDAASPYAPKVISEQNAFLTREMLYSNIWGGGEWSS 677

Query: 654 -VARAGTAAKAQAMLKRPDLYGKTGTTNDSLDAWFAGFQPTMTAISWIGYDT-PRNLG-- 709
                GT  +AQA LKR D+ GKTGTTNDS DAW+ G+ P +  ++W+G+D   RNLG  
Sbjct: 678 DTGWNGTGWRAQA-LKRRDIGGKTGTTNDSKDAWYNGYAPGIVGVAWVGFDDHSRNLGKT 736

Query: 710 -----------DRETGGGLSLPIWINYMETAIKGVPV 735
                        E+GG  +LP W+ +M  A++ VPV
Sbjct: 737 APNRNIEDDVSGAESGGKTALPAWVEFMSLALQDVPV 773