Pairwise Alignments

Query, 429 a.a., Diaminopimelate decarboxylase (EC 4.1.1.20) from Variovorax sp. SCN45

Subject, 417 a.a., diaminopimelate decarboxylase from Vibrio cholerae E7946 ATCC 55056

 Score =  436 bits (1120), Expect = e-127
 Identities = 224/401 (55%), Positives = 286/401 (71%), Gaps = 2/401 (0%)

Query: 19  QRDGALHVEGVALDALAREHGTPLFVYSKQWMLDALAAYQRGFEGRDALICYAMKANSSL 78
           Q DG L  E V L  LA ++GTPL+VYS+  +     A+ +       LICYA+KANS+L
Sbjct: 7   QEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAVKANSNL 66

Query: 79  GVLRVFAEAGCGFDIVSGGELSRVLAVGADPKKIIFSGVGKTRAEMRQALAAGIACFNVE 138
           GVL   A  G GFDIVS GEL RVLA G DP K++FSGVGKT AEM++AL   I CFNVE
Sbjct: 67  GVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKIKCFNVE 126

Query: 139 SEAELDVLSEVAAAEGKRAPISIRINPNVDPKTHPYISTGLKGNKFGIAHDRAVEAYRHA 198
           SE EL  L++VA   G +APIS+RINP+VD KTHPYISTGL+ NKFGI  DRA + YR A
Sbjct: 127 SEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLA 186

Query: 199 ARLPGLEVVGIDCHIGSQITEASPYLDACDRVLDLVEAIEAAGVPIHHLDFGGGLGIDYN 258
             LP L+V GIDCHIGSQ+T  +P++DA DR+L L+++++A G+ I HLD GGGLG+ Y 
Sbjct: 187 HSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGGLGVVYR 246

Query: 259 GEVPPKADALWQQLLAKLDARGFGQRKLVIEPGRSLVGNAGVCVTEVLYTKPGEDKNFCI 318
            E+PP+     + LL +L+       +L+ EPGR++  NAGV VT+V + K  E KNF I
Sbjct: 247 DELPPQPSEYAKALLDRLERH--RDLELIFEPGRAIAANAGVLVTKVEFLKHTEHKNFAI 304

Query: 319 IDAAMNDLPRPAMYQAFQRIVPVRTRAGDAPVYDVVGPVCESGDWIGRDRTLNVVAGDLL 378
           IDAAMNDL RPA+YQA+Q I+P+R R G+A  YD+VGPVCE+ D++G+DR L +  GDLL
Sbjct: 305 IDAAMNDLIRPALYQAWQDIIPLRPRQGEAQTYDLVGPVCETSDFLGKDRDLVLQEGDLL 364

Query: 379 AVLSAGAYCMSMASNYNTRGRAAEVLVSGAAAKLIRRRETM 419
           AV S+GAY  +M+SNYNTR R AEV+V G    L+R+RE +
Sbjct: 365 AVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREEL 405