Pairwise Alignments

Query, 246 a.a., GTP-binding protein EngB from Variovorax sp. SCN45

Subject, 494 a.a., ribosome biogenesis GTPase Der from Vibrio cholerae E7946 ATCC 55056

 Score = 45.8 bits (107), Expect = 2e-09
 Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 8/118 (6%)

Query: 54  LPEIAFVGRSNAGKSTAINTLTQQTRLAFASKTPGRTQHINLFGIGKQKVDDAVLADLPG 113
           +P +A VGR N GKST  N LT +TR A  +  PG T+    +G  K    + ++ D  G
Sbjct: 2   VPVVALVGRPNVGKSTLFNRLT-RTRDALVADFPGLTRD-RKYGQAKLGEHEFIVIDTGG 59

Query: 114 YGYAAVPREAKLRWQRVMGNYLMTRESLRGVVLMCDPRHGLTELDEILLDVIRPRVEQ 171
              +    E K+  Q      L   +    V+ M D R GLT  DE +   +R R+E+
Sbjct: 60  IDGSEEGVETKMAQQS-----LAAIDEADVVLFMVDGRAGLTVADEAIAQHLR-RIEK 111



 Score = 35.4 bits (80), Expect = 2e-06
 Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 11/174 (6%)

Query: 53  DLP-EIAFVGRSNAGKSTAINTLTQQTRLAFASKTPGRTQHINLFGIGKQKVDDAVLADL 111
           DLP ++A +GR N GKST  N +  + R+      PG T+  +++   K+   + VL D 
Sbjct: 203 DLPIKLAIIGRPNVGKSTLTNRILGEERVV-VYDMPGTTRD-SIYIPMKRDEREYVLIDT 260

Query: 112 PGYGYAAVPREAKLRWQRVMGNYLMTRESLRGVVLMCDPRHGLTELDEILLDVIRPRVEQ 171
            G        E   ++  V    L   E    V+L+ D R  +++ D   L ++   +  
Sbjct: 261 AGVRRRKRINETVEKFSVV--KTLQAIEDANVVLLVVDARENISDQD---LSLLGFALNS 315

Query: 172 GLKFLVLLTKSDKLT---RSEAAKVLSITRLNAGGGEVKLFSALKKQGVGEAAE 222
           G   ++ + K D L+   +    K L           +   SAL   GVG   E
Sbjct: 316 GRSIVIAVNKWDGLSFDVKEHVKKELDRRLGFVDFARIHFISALHGTGVGHLFE 369