Pairwise Alignments

Query, 436 a.a., Various polyols ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 481 a.a., periplasmic binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score = 74.7 bits (182), Expect = 6e-18
 Identities = 90/412 (21%), Positives = 162/412 (39%), Gaps = 51/412 (12%)

Query: 53  IKLKWVTLEEGTLRQRVTTDIATKGGQFDVMTIGLYEAPIWSKKGWLK--------PIAT 104
           I++ +    E     +VT  +++   ++D    G Y    +   GW+         P  T
Sbjct: 88  IEVTYDVFPEDVYFDKVTAALSSGSSEYDAFMTGAYMTWTYGPAGWITDLNEWIKDPAKT 147

Query: 105 DAAYDIDDLLPAIRNGLSYEG-----------KLYAAPFYGESSMLMYRKDLADKVGVKF 153
           +  Y  DD LP ++   ++ G           K +  P+  E + L Y +++ +KVG   
Sbjct: 148 NPQYGWDDFLPGVKASCAWNGQPGGALGSEDAKQWCIPWGYEQNNLSYNQEMFEKVGASV 207

Query: 154 PDQPTWAQVKEFADKAN-DPKNGVYGMCLRGKPGWGD-NMAFLTTLVNTNGGQWF---DM 208
           P      ++   A K N D   GVYG+ +RG   W   +  FL+   N          D 
Sbjct: 208 PKNLD--ELVATAAKLNKDVGGGVYGIGVRGSRSWATIHPGFLSGYANFGQKDLNVSEDG 265

Query: 209 QWKPQIDTKAWKDAITFYVDIMKKDGPQGASANSFNENLALFNEGKCAAWVDATIAASFI 268
           +    ++T   K     +V ++++ GP+  S  ++ +       G  A   DA I   F+
Sbjct: 266 KLSAAMNTAESKAFHAKWVQMIQESGPKDWSTYTWYQVGTDLGAGASAMIYDADILGYFM 325

Query: 269 SDPKQSRVADKVA---FAQAPTAVTPKGANWLWSWNLAIPASSTKDEAAQKFIKWATSKD 325
           +    +++A K+A   FA  P A  P    W+WS  LA+   +   +A   F++WA+  +
Sbjct: 326 NGG-DNKMAGKLAYAPFAANPEAKAPTPNIWIWS--LAMSNFAKDKDATWYFLQWASGLE 382

Query: 326 YIALVAKETGWASVPTGTRKSTYANPEFQKVAK---FAEAEKKAIDS-ANLTDSTLPKSP 381
           +               G  K  + NP    V K   F E   K+      + D + P + 
Sbjct: 383 HAIF------------GATKMDFVNPVRASVWKDEIFRERLNKSYPGYVEMHDVSAPGAK 430

Query: 382 YVGVQYAAIPEFQAIGVSVGQQMSAALAGKVTVEQALKTSQTLAEREMKKAG 433
              + +   P F  +       +   +A +V V++ L        R++ +AG
Sbjct: 431 ---IHFTPQPLFFDLTTEWAATLQKMVAKEVPVDEGLDRLVESINRQLAEAG 479