Pairwise Alignments

Query, 436 a.a., Various polyols ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 497 a.a., extracellular solute-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score = 46.6 bits (109), Expect = 2e-09
 Identities = 93/388 (23%), Positives = 153/388 (39%), Gaps = 74/388 (19%)

Query: 40  QKLTPFFEKANPDIKLKWVTLEEGTLRQRVTTDIATKGGQFDVMTIGLYEAPIWSKKGWL 99
           + L  F EK    +K+  V+ E  ++ +  T  +    G++D++T+    A  W+  G+ 
Sbjct: 69  EMLPKFTEKTG--VKVNVVSTELESMFELQTQALLQGEGKYDLLTMEAGWAKEWAANGYT 126

Query: 100 KPIATDAA-YD----------IDDLLPAIRNGLSYEGKLYAAPFYGESSMLMYRKDLADK 148
            P+   A  YD          ++   P++ N LSY G+L+A P+        YR DL + 
Sbjct: 127 VPLPELAKLYDPDGEKAMERYLEPYYPSLLNILSYHGELHAIPYNNYVMGSHYRADLFEN 186

Query: 149 VGVK--------FPDQPTWAQVKEFADKA-------------NDPKNGVYGMCLR--GKP 185
              +        +P +P      E  D+A                 +  YG+ L    KP
Sbjct: 187 KTEQTHFQQRFGYPLKPA-TNFDELQDQAVFFTRKSGELLADKQLSHNFYGLALMSGNKP 245

Query: 186 GWGDNMAFLTTLVNTNGGQW----FDMQWK------PQIDTKAWKDAITFYVDIMKKDGP 235
              D     ++++ + GG W    ++ Q +      P ++ +A K AI     I +K  P
Sbjct: 246 HINDE---FSSIIWSLGGAWMWPIYNQQKQLTHFEVPAVNQEALKAAI-----IYRKLMP 297

Query: 236 QGASAN---SFNENLALFNEGKCAAWVDA---TIAASFISDPKQSRVADKVAFAQAPTAV 289
               A+   +FNE       G+ A W  A     +ASF       +V   V  A+   A 
Sbjct: 298 YAIPADDKFAFNEAANAMASGQVAIWPFAYNNLWSASF-------KVEANVPGARLGVAQ 350

Query: 290 TPKGANWLWSWNLAIPASSTKDEAAQKFIKWATSKDYIALVAKETGWASVPTGTRKSTYA 349
            P G  +  ++  A+   S   +AA   +K+  +  Y A  A   G  +     R     
Sbjct: 351 VPGGTPYNGAYAFAVSYDSKNPQAAYWLLKYMGT--YEAQYAYALGGGN---PCRMDVVT 405

Query: 350 NPEFQKVAKFAEAEK-KAIDSANLTDST 376
            PEF + +K A A   +A   ANL  ST
Sbjct: 406 APEFNQASKRAIAGAFEASHIANLFWST 433