Pairwise Alignments

Query, 349 a.a., Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 329 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  235 bits (600), Expect = 1e-66
 Identities = 137/308 (44%), Positives = 181/308 (58%), Gaps = 20/308 (6%)

Query: 1   MNGIEFRNITKRYGTDKNAPLAVKGISFEVPVGTLTTILGPSGCGKTTTLRMIAGLESPT 60
           M+ +   N+ K Y +          I+  +  G   T+LGPSGCGK+T LR IAGL    
Sbjct: 1   MSFVSIENLQKSYASTS----VFSDINCSIAKGEFVTLLGPSGCGKSTLLRCIAGLTPVN 56

Query: 61  SGAIFMGGRDVTTLGPAERNVSMMFQSYALFPHMNVIENVGYGLRMSGVKKDEATARARE 120
           SG I + G D+  L P +RN+ M+FQSYALFP+M V +NV +GLR+  V  DE+T R  E
Sbjct: 57  SGRILLDGSDLVPLTPQKRNIGMVFQSYALFPNMTVEQNVAFGLRIQKVSADESTRRVAE 116

Query: 121 ALRGVGLVGFDERLPSELSGGQQQRVALARALVLEPAVLLFDEPLSNLDARLRREMREEI 180
            LR V L  F  R P +LSGGQ QRVALAR+LV  P +LL DEPLS LDAR+R+ +RE+I
Sbjct: 117 ILRMVELHDFATRYPHQLSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKNLREQI 176

Query: 181 RALQQRLKLTVAYVTHDQSEALAVSDQIIVMDHGVIAQRGTPEQLYGRPESEFVAGFMGE 240
           RA+Q+ L LT  +VTHDQ EAL +SD+I +M+ G I Q G  E LY  P   F AGF+G 
Sbjct: 177 RAIQRELGLTTIFVTHDQEEALTMSDRIFLMNQGRIVQSGDAETLYTAPVDVFAAGFIGN 236

Query: 241 ASVFPATAQPDGSVAMGPLRLQPRHAVAPGAVKVAVRPEAWRIGAGGAADGLPATLRKAA 300
            ++  A             RL  R    P   +VA+RPE+ ++   G  +G    +R  +
Sbjct: 237 YNLLEAD---------DATRLMQR----PINSRVAIRPESIQLSLTGELEG---EIRSHS 280

Query: 301 YLGSFYEY 308
            LG+   Y
Sbjct: 281 LLGNVIRY 288