Pairwise Alignments

Query, 349 a.a., Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 356 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  237 bits (604), Expect = 4e-67
 Identities = 130/285 (45%), Positives = 176/285 (61%), Gaps = 12/285 (4%)

Query: 4   IEFRNITKRYGTDKNAPLAVKGISFEVPVGTLTTILGPSGCGKTTTLRMIAGLESPTSGA 63
           + F+N+ K YG     P AV  +   V  G   T+LGPSGCGK+TTLRM+ G E P+SG 
Sbjct: 5   VHFKNVNKYYG---GLP-AVDDLDLAVESGQFVTLLGPSGCGKSTTLRMLGGFEQPSSGE 60

Query: 64  IFMGGRDVTTLGPAERNVSMMFQSYALFPHMNVIENVGYGLRMSGVKKDEATARAREALR 123
           I++ G+ +T L P  RNV+++FQ YALFPH+NV  N+ +GL + G+  D    R  E L 
Sbjct: 61  IYLEGKPITHLPPNRRNVNIVFQDYALFPHLNVGRNIAFGLELKGLSSDAIHKRTMELLA 120

Query: 124 GVGLVGFDERLPSELSGGQQQRVALARALVLEPAVLLFDEPLSNLDARLRREMREEIRAL 183
            V L  F +R+P +LSGGQ+QRVAL RAL  +P VLL DEPLS LDA+LR++M+ E++ +
Sbjct: 121 LVKLQDFADRMPDQLSGGQRQRVALMRALAPDPNVLLLDEPLSALDAKLRQQMQIELKTI 180

Query: 184 QQRLKLTVAYVTHDQSEALAVSDQIIVMDHGVIAQRGTPEQLYGRPESEFVAGFMGEASV 243
           Q+    T  +VTHDQ EAL +SD I+VM+ G I Q G P +LY RP S FVA F+G+++ 
Sbjct: 181 QRTTGKTFIFVTHDQEEALTMSDVIVVMNKGRIEQMGGPNELYSRPRSRFVANFIGQSNF 240

Query: 244 FP--------ATAQPDGSVAMGPLRLQPRHAVAPGAVKVAVRPEA 280
                      TA  D + ++    L      A     VA+RPEA
Sbjct: 241 LEGKLLSHDGTTAAIDWNGSIIHADLNGTKLPAGSGATVALRPEA 285