Pairwise Alignments

Query, 349 a.a., Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 363 a.a., sugar ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  246 bits (629), Expect = 5e-70
 Identities = 132/289 (45%), Positives = 182/289 (62%), Gaps = 6/289 (2%)

Query: 1   MNGIEFRNITKRYGTDKNAPLAVKGISFEVPVGTLTTILGPSGCGKTTTLRMIAGLESPT 60
           M  +E RN+ KR+G    A   V G+S E+  G    ++GPSGCGK+T LRMIAGLE  +
Sbjct: 1   MASVEIRNVVKRFG----ALEVVHGVSAEIADGEFVALVGPSGCGKSTLLRMIAGLEEIS 56

Query: 61  SGAIFMGGRDVTTLGPAERNVSMMFQSYALFPHMNVIENVGYGLRMSGVKKDEATARARE 120
            GA+ +GG  V  + P +RN+SM+FQ+YAL+PHM V EN+ + LR++ + KDE   +  E
Sbjct: 57  DGAVVIGGDIVNEVAPKDRNISMVFQNYALYPHMTVAENMAFALRLARLPKDEQKRKVGE 116

Query: 121 ALRGVGLVGFDERLPSELSGGQQQRVALARALVLEPAVLLFDEPLSNLDARLRREMREEI 180
           A   +GL G  +R P +LSGGQ+QRVA+ RA+V  P V LFDEPLSNLDA+LR +MR EI
Sbjct: 117 AATMLGLGGLLDRYPGQLSGGQRQRVAMGRAIVRRPEVFLFDEPLSNLDAKLRVQMRAEI 176

Query: 181 RALQQRLKLTVAYVTHDQSEALAVSDQIIVMDHGVIAQRGTPEQLYGRPESEFVAGFMGE 240
           + L QRL+ T  YVTHDQ EA+ ++D+I+VM  G + Q GTP +++  P + FVA F+G 
Sbjct: 177 KGLHQRLRTTSIYVTHDQIEAMTMADRIVVMRDGNVEQIGTPLEIFDYPRNLFVASFIGS 236

Query: 241 ASVFPATAQPDGSV--AMGPLRLQPRHAVAPGAVKVAVRPEAWRIGAGG 287
            S+     +  G    A G + +        G     +RP   +IGA G
Sbjct: 237 PSMNFIEGEVVGGTFRAPGGIIIPAPDLAHKGPTVAGIRPNKLQIGATG 285