Pairwise Alignments

Query, 349 a.a., Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) from Variovorax sp. SCN45

Subject, 322 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

 Score =  229 bits (585), Expect = 6e-65
 Identities = 128/305 (41%), Positives = 184/305 (60%), Gaps = 22/305 (7%)

Query: 4   IEFRNITKRYGTDKNAPLAVKGISFEVPVGTLTTILGPSGCGKTTTLRMIAGLESPTSGA 63
           +   NI+K +  +K+  L    I FE     L +++G SGCGKTT LR+IAG E P +G 
Sbjct: 3   LRLENISKNF--EKHGVLT--DIDFECGE-ELVSLVGSSGCGKTTCLRIIAGFEKPDAGK 57

Query: 64  IFMGGRDVTTLGPAERNVSMMFQSYALFPHMNVIENVGYGLRMSGVKKDEATARAREALR 123
           IF+ G D+T + P +RN+ ++FQ+YALFPH+NV EN+ YGL++      + + + + ++ 
Sbjct: 58  IFLNGEDITNVPPNKRNIGLVFQNYALFPHLNVFENIAYGLKLKKFSNLDISKKVKNSID 117

Query: 124 GVGLVGFDERLPSELSGGQQQRVALARALVLEPAVLLFDEPLSNLDARLRREMREEIRAL 183
            V L G+++   SELSGG QQRVA+ARA+V+EP  +L DEPLSNLDA+LR +MR+E++ L
Sbjct: 118 LVNLGGYEKYPISELSGGMQQRVAIARAIVIEPKAMLLDEPLSNLDAKLRIKMRKELKEL 177

Query: 184 QQRLKLTVAYVTHDQSEALAVSDQIIVMDHGVIAQRGTPEQLYGRPESEFVAGFMGEASV 243
           Q+  ++   YVTHDQ EALA+SD++ VM+ G I Q G P  +Y  P++EFVA F+G  + 
Sbjct: 178 QRNFEIPTIYVTHDQEEALAISDKVAVMNRGKIEQFGDPYSIYSNPKTEFVAKFIGIINE 237

Query: 244 FPATAQPDGSVAMGPLRLQPRHAVAPGAVKVAVRPEAWRIGAGGAADGLPATLRKAAYLG 303
                         PL +     +  G  K  VRPE+  IG G         L    +LG
Sbjct: 238 I-------------PLSILNELDIESGDKKYFVRPESIEIGKG----NFKGKLVDYEFLG 280

Query: 304 SFYEY 308
           S   Y
Sbjct: 281 SIIRY 285