Pairwise Alignments

Query, 501 a.a., Na+/solute symporter from Variovorax sp. SCN45

Subject, 483 a.a., sodium/proline symporter (RefSeq) from Shewanella loihica PV-4

 Score = 73.2 bits (178), Expect = 2e-17
 Identities = 109/488 (22%), Positives = 193/488 (39%), Gaps = 45/488 (9%)

Query: 10  LSVFVFFFLLVTVMGFWASRWQSGGAKGKGAHLDEWGLGGRNFGTWITWFLVGGDFYTAY 69
           L  F  + +L+  +G WA +            +D++ LGGR+ G  +T   VG    + +
Sbjct: 8   LVTFFGYLILMMGIGLWAYKATDS--------VDDYILGGRSMGPAVTALSVGASDMSGW 59

Query: 70  TVIAVPALVYAVG-AYGFFALPYTILVYPIVFIIMPRLW-HAAHKAGHVTAADVVYGRYG 127
            ++ +P  VY  G    +  +      +     +  RL  +       +T  D    R+ 
Sbjct: 60  LLLGLPGAVYLGGLGEAWIGIGLVFGAWLNWLFVAKRLRIYTQFTDNALTLPDFFEKRFE 119

Query: 128 SR--ALELAIAVTGVVATMPYIALQLVGMEVVI-KALGLTGELPLAAAFVILALYTYSAG 184
            +   L+L  AVT +V    Y +  +VG  ++  K  GL   L L     I+  YT+  G
Sbjct: 120 DKQSVLKLVSAVTILVFFTFYTSSGMVGGAILFEKVFGLDYNLALLIGSGIIVAYTFVGG 179

Query: 185 LRAPALIAFVKDLMIYIVVLVAVVLV---PMKLGGYGSVFHAAGDAFAAKGGATGLTLKP 241
             A +   F +  ++ I +L+  V +   P    G  S+  A     +      GL    
Sbjct: 180 FFAVSWTDFFQGCLMLIALLIVPVTIFSQPETQNGIHSLDPAMLSLLSDNTTMIGL---- 235

Query: 242 AQYLPYASLALGSALAAFMYPHTLTGIFAAKSANTIRKNAVFLPAYTVLLGLIALLGYMA 301
                 ASL L   L  F  PH L+   A  SA+ ++ +     ++ +    +AL+G +A
Sbjct: 236 ------ASL-LAWGLGYFGQPHILSRFMAIGSADDLKVSRRIAMSWMI----VALMGALA 284

Query: 302 -------YAAHLTVKSNNDVVPALFNALFPSWFAGFAFAAIAIGALVPAAVMSIGAANLF 354
                  Y A   + +   +   L +A F  W  G   AAI    +       +  +++ 
Sbjct: 285 TGLAGTLYFADQPIDNPETIFIHLAHAAFNPWIGGLLVAAILSAIMSTIDSQLLVCSSVI 344

Query: 355 TRNFWKAYVRPDVTPAGEARVAKIVSLVVKLGALVFILFLPTQFALDLQLLGGLWILQTF 414
           T +F+K ++RPD +      + +I  L + + + V I   P    L L           F
Sbjct: 345 TEDFYKKWLRPDASSKELMMIGRIGVLTIAVISGV-IALNPESSVLSLVSYAWAGFGAAF 403

Query: 415 -PAVVFGLFFGWFRAPALLAGWAVG-LAGGSWLAFSDGIKPVHTFVIGGDSFTLYTGLAA 472
            P V+  LF+  +     +A   VG +    W   + GI  ++  + G     L+  LA 
Sbjct: 404 GPVVILSLFWRGYSRNGAVATIIVGAITVVLWKQSTGGIFDLYEILPG----FLFATLAG 459

Query: 473 LALNIVVA 480
           + +++V A
Sbjct: 460 VLVSLVSA 467