Pairwise Alignments

Query, 501 a.a., Na+/solute symporter from Variovorax sp. SCN45

Subject, 477 a.a., sodium:solute symporter from Methanococcus maripaludis S2

 Score = 72.8 bits (177), Expect = 3e-17
 Identities = 103/471 (21%), Positives = 182/471 (38%), Gaps = 57/471 (12%)

Query: 47  LGGRNFGTWITWFLVGGDFYTAYTVIAVPALVYAVGAYGF-FALPYTILVYPIVFIIMPR 105
           LGGRN   W++ F  G  +++A   I         G  G+ F +P   +V     I    
Sbjct: 21  LGGRNVNPWMSAFSYGTAYFSAVIFIGF------AGKMGWSFGIPTMWIVVGNTIIGSFL 74

Query: 106 LWHAAHKA--------GHVTAADVVYGRYGSRALELAIAVTGVVATMPYIALQLVGMEVV 157
            W    K         G  T    +  RY S+ LE   A       +PY A    G+  +
Sbjct: 75  AWQVLGKKTREMTQRLGASTMPSFLEKRYKSKNLESLTAFIIFFFLVPYSASIYKGLNFL 134

Query: 158 IKALGLTGELPLAAAFVILALYTYSAGLRAPALIAFVKDLMIYIVVLVAVVLVPM--KLG 215
            +  G++          + A+Y Y  G  A  L  FV+  ++ I VL+ V  +    ++G
Sbjct: 135 FEGFGISPMNAYILMAALTAIYLYFGGFIAATLADFVQGCIMVIGVLLMVFFLGSNPEVG 194

Query: 216 GYGSVFHAAGDAFAAKGGATGLTLKPAQYLPYASLALGSALAAFMYP------HTLTGIF 269
           G+  +        ++        +  A ++P   LAL +++ ++  P      +T+    
Sbjct: 195 GFSGML----SNLSSIDPMLVTPINEASFIPIMGLALLTSIGSWGLPQMIHKFYTIKSEK 250

Query: 270 AAKSANTIRKNAVFLPAY-TVLLGLIALLGY--MAYAAHLTVKSNNDVVPALFNALFPSW 326
           AA SA  +     F+  +    +G ++ L Y   A  A   + S + +VP +     P W
Sbjct: 251 AAVSAKWVSTAFAFIITFGAAYIGTVSRLFYPDAASKAAAGLTSPDMIVPKIMEIALPDW 310

Query: 327 FAGFAFAAIAIGALVPAAVMSIGAANLFTRNFWKAYVRPDVTPAGEARVAKIVSLVVKLG 386
            A      +   ++   A + + ++++ + +F K  ++ D++      + ++  L V   
Sbjct: 311 VAALILVLVISASMSTLASLVLASSSVVSIDFVKGRLKTDLSDKNTMILMRL--LCVLFV 368

Query: 387 ALVFIL-FLPTQFALDLQLLGGLWILQTFPAVVFGLFFGWFRAPALLA-GWAVGLAGGSW 444
            L FIL  +P  + L L             A+ +GL  G   AP  L   W      G W
Sbjct: 369 VLSFILAIVPNSYVLSLM------------ALSWGLVSGCLLAPYFLGLYWKRTTKEGVW 416

Query: 445 LAFSDGIKPVHTFVIGGDSF----TLY---TGLAALALNIVVAVVVQLVVK 488
                GI      ++GG  +    ++Y    G  A+   I V + V L+ K
Sbjct: 417 A----GITSALAIMLGGAYYFGINSVYMPAVGSLAMIAPIFVVMAVSLITK 463