Pairwise Alignments

Query, 501 a.a., Na+/solute symporter from Variovorax sp. SCN45

Subject, 489 a.a., sodium:solute symporter from Methanococcus maripaludis JJ

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 102/471 (21%), Positives = 181/471 (38%), Gaps = 57/471 (12%)

Query: 47  LGGRNFGTWITWFLVGGDFYTAYTVIAVPALVYAVGAYGF-FALPYTILVYPIVFIIMPR 105
           LGGRN   W++ F  G  +++A   I         G  G+ F +P   +V     I    
Sbjct: 33  LGGRNVNPWMSAFSYGTAYFSAVIFIGF------AGKMGWSFGIPTMWIVVGNTIIGSFL 86

Query: 106 LWHAAHKA--------GHVTAADVVYGRYGSRALELAIAVTGVVATMPYIALQLVGMEVV 157
            W    K         G  T    +  RY S+ LE   A       +PY A    G+  +
Sbjct: 87  AWQVLGKKTREMTQRLGASTMPSFLEKRYKSKNLESLTAFIIFFFLVPYSASIYKGLNFL 146

Query: 158 IKALGLTGELPLAAAFVILALYTYSAGLRAPALIAFVKDLMIYIVVLVAVVLVPM--KLG 215
            +  G++          + A+Y Y  G  A  L  FV+  ++ I VL+ V  +    ++G
Sbjct: 147 FEGFGISPMNAYILMAALTAIYLYFGGFIAATLADFVQGCIMVIGVLLMVFFLGSNPEVG 206

Query: 216 GYGSVFHAAGDAFAAKGGATGLTLKPAQYLPYASLALGSALAAFMYP------HTLTGIF 269
           G+  +        ++        +  A ++P   LAL +++ ++  P      +T+    
Sbjct: 207 GFFGML----SNLSSIDPMLVTPINEASFIPIMGLALLTSIGSWGLPQMIHKFYTIKSEK 262

Query: 270 AAKSANTIRKNAVFLPAY-TVLLGLIALLGY--MAYAAHLTVKSNNDVVPALFNALFPSW 326
           AA SA  +     F+  +    +G ++ + Y   A  A   + S + +VP +     P W
Sbjct: 263 AAVSAKWVSTAFAFIITFGAAYIGTVSRVFYPDSASKAAAGLTSPDMIVPKIMEIALPDW 322

Query: 327 FAGFAFAAIAIGALVPAAVMSIGAANLFTRNFWKAYVRPDVTPAGEARVAKIVSLVVKLG 386
            A      +   ++   A + + ++++ + +F K  ++ D++      + ++  L V   
Sbjct: 323 VAALILVLVISASMSTLASLVLASSSVVSIDFVKGRLKTDLSDRNTMILMRL--LCVLFV 380

Query: 387 ALVFIL-FLPTQFALDLQLLGGLWILQTFPAVVFGLFFGWFRAPALLA-GWAVGLAGGSW 444
            L FIL  +P  + L L             A+ +GL  G   AP  L   W      G W
Sbjct: 381 VLSFILAIVPNSYVLSLM------------ALSWGLVSGCLLAPYFLGLYWKRTTKQGVW 428

Query: 445 LAFSDGIKPVHTFVIGGDSF----TLY---TGLAALALNIVVAVVVQLVVK 488
                GI      + GG  +    ++Y    G  A+   I V + V L+ K
Sbjct: 429 A----GITSALVIMFGGAYYFGINSVYMPAVGSLAMIAPIFVVMAVSLITK 475