Pairwise Alignments

Query, 345 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  264 bits (674), Expect = 5e-75
 Identities = 132/247 (53%), Positives = 175/247 (70%)

Query: 45  RVLLHAVDGVSFSIERGKTLALVGESGCGKSTVARLLVGLYAPTRGGLQFDGQDAHAAFK 104
           R  + A + VSF++  G+T  LVGESG GKST+AR++ GLY P  G + F+G D  A   
Sbjct: 323 REYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAGLYQPNAGRVTFEGIDLTALKS 382

Query: 105 TSEGRKLRRRIQMIFQDPYASLNPRWIVEDIIGEPLREHGIISDKAALRERVGELLKSVG 164
             E R LRR++QM+FQ+PY S+NPR  + DII EP+R H +   ++  R+ V +LL+ VG
Sbjct: 383 EHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTRSESETRQIVNDLLEHVG 442

Query: 165 LSPLDMSKYPHQFSGGQRQRISIARALATQPEFLVCDEPTSALDVSVQAQVLNIMKDLQR 224
           L  +   KYPH+FSGGQRQRISIARALAT+P  L+CDEPTSALDVSVQAQ+LN++KDLQ 
Sbjct: 443 LGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQAQILNLLKDLQD 502

Query: 225 EQGLTYLFISHNLAVVRHVADQVGVMYLGRLVEVADKQKLFAAPQHPYTRMLLDAIPQMK 284
           E  LT LFISH+L V+R + D+VGVM +G L+EVA  ++LF  PQH Y++ L+  +P+  
Sbjct: 503 ELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTDPQHEYSKKLISLMPEFT 562

Query: 285 HTGRSRT 291
               S T
Sbjct: 563 GLRESTT 569



 Score =  175 bits (443), Expect = 3e-48
 Identities = 95/239 (39%), Positives = 149/239 (62%), Gaps = 7/239 (2%)

Query: 50  AVDGVSFSIERGKTLALVGESGCGKSTVARLLVGLYAPT---RGGLQFDGQDAHAAFKTS 106
           AV  ++  I+RG+ + +VGESG GKSTV   ++ L +P     GG  +   +  +     
Sbjct: 22  AVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGTIAGGEVYLNGEKISGLSPQ 81

Query: 107 EGRKLR-RRIQMIFQDPYASLNPRWIVEDIIGEPLREHGIISDKAALRERVGELLKSVGL 165
             R++R  +I  IFQDP  SLNP + VE  + E +  +  +S + A  +R   L+K VG+
Sbjct: 82  AMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANMQVSAEEAY-QRALSLMKQVGI 140

Query: 166 SPLD--MSKYPHQFSGGQRQRISIARALATQPEFLVCDEPTSALDVSVQAQVLNIMKDLQ 223
              +  + +YPHQFSGG RQR+ IA ALA +P+ ++ DEPT+ALDVS+Q Q+LN++++L 
Sbjct: 141 PQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEPTTALDVSIQDQILNLIRELC 200

Query: 224 REQGLTYLFISHNLAVVRHVADQVGVMYLGRLVEVADKQKLFAAPQHPYTRMLLDAIPQ 282
           ++  +  + ++H++ VV +V D+V VMY G LVE     K+   P+HPYTR L+ A+P+
Sbjct: 201 KKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAKVLGTPEHPYTRSLISAVPR 259