Pairwise Alignments

Query, 356 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 324 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  289 bits (740), Expect = 6e-83
 Identities = 149/316 (47%), Positives = 211/316 (66%), Gaps = 2/316 (0%)

Query: 1   MTLLQVKDLVVEFPHRRGTLRALDRISFDIAPGEILGVVGESGAGKSLTGAAIIGLLESP 60
           M+LL VKDL VEF  + G + A++ ++F +  GE LG+VGESG+GKS T  AI+GLL   
Sbjct: 2   MSLLDVKDLRVEFSTQDGIVTAVNDLNFSLKQGETLGIVGESGSGKSQTVFAIMGLLAKN 61

Query: 61  GRVAGGEIRLEGQRIDNLGFDAMRPIRGRKIGAIFQDPLTSLNPLYTVGRQLVETIRAHL 120
           G++ G   + EG+ I NL    +  +R  +I  IFQDP+TSLNP   V  QL+E +  H 
Sbjct: 62  GKITGSA-KFEGKEILNLPERELNKVRAEQIAMIFQDPMTSLNPYMKVSDQLMEVLMLHK 120

Query: 121 PVTDAEARKRAIGLLQDTGIPAAEQRIDHFPHQFSGGMRQRVVIALALAAEPKLIVADEP 180
            +  AEA + ++ +L+   IP A +RI  +PH+FSGGMRQRV+IA+AL   PKL++ADEP
Sbjct: 121 GMGKAEAFEESVRMLEAVKIPEARKRITMYPHEFSGGMRQRVMIAMALLCRPKLLIADEP 180

Query: 181 TTALDVSIQAQIIQLLKRICKERGAAVMLITHDMGVIAETCDRVAVMYAGRIAEIGPVHE 240
           TTALDV++QAQI++LL  + +E   A+++ITHD+GV+A +CD+V VMYAGR  E G V++
Sbjct: 181 TTALDVTVQAQIMELLNELKREFNTAIIMITHDLGVVAGSCDKVLVMYAGRTMEYGSVND 240

Query: 241 VIHQPAHPYTSGLMASIPDMTSDRERLNQIDGAMPRLNAIPTGCAYNPRCPRTFARCLTE 300
           + + P+HPY  GL+++IP + ++ E L  I G  P L  +P GC Y  RC R   RC  E
Sbjct: 241 IFYNPSHPYAEGLLSAIPRLDTEGEVLPTIPGNPPNLLRLPVGCPYQERCHRVTDRCKRE 300

Query: 301 RPELMNAGATR-AACW 315
            P L+  G +R  AC+
Sbjct: 301 APILLPFGNSRQRACF 316