Pairwise Alignments

Query, 356 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  302 bits (774), Expect = 1e-86
 Identities = 150/265 (56%), Positives = 194/265 (73%), Gaps = 2/265 (0%)

Query: 1   MTLLQVKDLVVEFPHRRGTLRALDRISFDIAPGEILGVVGESGAGKSLTGAAIIGLLESP 60
           M+LL+VK+L +E+P R G   A+  ++ DI  GEI+GVVGESGAGKS  G A+I LL  P
Sbjct: 1   MSLLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPP 60

Query: 61  GRVAGGEIRLEGQRIDNLGFDAMRPIRGRKIGAIFQDPLTSLNPLYTVGRQLVETIRAHL 120
           G +AGGE+ L G++I  L   AMR +RG KIG IFQDP+TSLNPL+TV  QL ETI A++
Sbjct: 61  GTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANM 120

Query: 121 PVTDAEARKRAIGLLQDTGIPAAEQRIDHFPHQFSGGMRQRVVIALALAAEPKLIVADEP 180
            V+  EA +RA+ L++  GIP  E R+  +PHQFSGGMRQRVVIA+ALA EP LI+ADEP
Sbjct: 121 QVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEP 180

Query: 181 TTALDVSIQAQIIQLLKRICKERGAAVMLITHDMGVIAETCDRVAVMYAGRIAEIGPVHE 240
           TTALDVSIQ QI+ L++ +CK+     ML+THDMGV++   DRVAVMY G + E GP  +
Sbjct: 181 TTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAK 240

Query: 241 VIHQPAHPYTSGLMASIPDMTSDRE 265
           V+  P HPYT  L++++P   SDR+
Sbjct: 241 VLGTPEHPYTRSLISAVP--RSDRK 263



 Score =  174 bits (440), Expect = 7e-48
 Identities = 101/255 (39%), Positives = 152/255 (59%), Gaps = 9/255 (3%)

Query: 13  FPHRRGTLRALDRISFDIAPGEILGVVGESGAGKSLTGAAIIGLLE-SPGRVAGGEIRLE 71
           F  RR  ++A + +SF +  GE  G+VGESG+GKS     I GL + + GRV    I L 
Sbjct: 319 FESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIAGLYQPNAGRVTFEGIDLT 378

Query: 72  GQRIDNLGFDAMRPIRGRKIGAIFQDPLTSLNPLYTVGRQLVETIRAH-LPVTDAEARKR 130
             + ++      RP+R R++  +FQ+P TS+NP   +   + E IR H L  +++E R+ 
Sbjct: 379 ALKSEH----ERRPLR-RQMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTRSESETRQI 433

Query: 131 AIGLLQDTGIPAAEQRIDHFPHQFSGGMRQRVVIALALAAEPKLIVADEPTTALDVSIQA 190
              LL+  G+   +     +PH+FSGG RQR+ IA ALA  P+L++ DEPT+ALDVS+QA
Sbjct: 434 VNDLLEHVGL--GKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQA 491

Query: 191 QIIQLLKRICKERGAAVMLITHDMGVIAETCDRVAVMYAGRIAEIGPVHEVIHQPAHPYT 250
           QI+ LLK +  E    ++ I+HD+ VI + CDRV VM  G + E+ P  ++   P H Y+
Sbjct: 492 QILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTDPQHEYS 551

Query: 251 SGLMASIPDMTSDRE 265
             L++ +P+ T  RE
Sbjct: 552 KKLISLMPEFTGLRE 566