Pairwise Alignments

Query, 356 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  251 bits (642), Expect = 2e-71
 Identities = 126/257 (49%), Positives = 176/257 (68%), Gaps = 1/257 (0%)

Query: 3   LLQVKDLVVEFPHRRGTLRALDRISFDIAPGEILGVVGESGAGKSLTGAAIIGLLESP-G 61
           LL+VKDL V+F    G  RA   +SF +  GE L ++GESG+GKS++ +AI+GL+++P G
Sbjct: 6   LLEVKDLTVDFLSLGGAFRATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLIDTPPG 65

Query: 62  RVAGGEIRLEGQRIDNLGFDAMRPIRGRKIGAIFQDPLTSLNPLYTVGRQLVETIRAHLP 121
            +  G +   G+ + +L     R + GR+I  IFQDPL+ LNP+YT+G QL E    H  
Sbjct: 66  DICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVFTVHGV 125

Query: 122 VTDAEARKRAIGLLQDTGIPAAEQRIDHFPHQFSGGMRQRVVIALALAAEPKLIVADEPT 181
            + AEAR+RAI +L   GIP  E+RID +PHQFSGG RQR++I +A+A  P++++ADEPT
Sbjct: 126 ASGAEARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEILIADEPT 185

Query: 182 TALDVSIQAQIIQLLKRICKERGAAVMLITHDMGVIAETCDRVAVMYAGRIAEIGPVHEV 241
           TALDVS+QAQI++LLK++  E G A+++ITHD+ V A   DRV VM +GRI E G    V
Sbjct: 186 TALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEEGEARAV 245

Query: 242 IHQPAHPYTSGLMASIP 258
              PAH YT  L+ ++P
Sbjct: 246 FENPAHSYTRTLINALP 262



 Score =  165 bits (418), Expect = 2e-45
 Identities = 94/240 (39%), Positives = 135/240 (56%), Gaps = 8/240 (3%)

Query: 20  LRALDRISFDIAPGEILGVVGESGAGKSLTGAAIIGLLESPGRVAGGEIRLEGQRIDNLG 79
           L A+  +SFD+A GE +G+VGESG+GKS     ++GL E+    +GGE    G+ +  + 
Sbjct: 303 LHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGLNEA----SGGEALFHGRDVLKMD 358

Query: 80  FDAMRPIRGRKIGAIFQDPLTSLNPLYTVGRQLVETIRAHLPVTDAEA-RKRAIGLLQDT 138
              +   R RK+  +FQDP +S+NP  TV   + E  R H  + +    R R   LL   
Sbjct: 359 RKQLLAFR-RKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKDILEKTRWRDRVTELLGLV 417

Query: 139 GIPAAEQRIDHFPHQFSGGMRQRVVIALALAAEPKLIVADEPTTALDVSIQAQIIQLLKR 198
           G+     +   +PHQFSGG RQR+ IA ALA +P+L+V DE  +ALDVS+Q Q+I LL  
Sbjct: 418 GLNPEHAK--RYPHQFSGGQRQRIAIARALACDPELVVCDEAVSALDVSVQVQVIDLLAE 475

Query: 199 ICKERGAAVMLITHDMGVIAETCDRVAVMYAGRIAEIGPVHEVIHQPAHPYTSGLMASIP 258
           +    G A + ITHD+ ++    DR+ VM +G I E     E+   P H YT  L+ + P
Sbjct: 476 LRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIFRNPQHAYTRQLINATP 535