Pairwise Alignments

Query, 303 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 312 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  316 bits (810), Expect = 4e-91
 Identities = 151/297 (50%), Positives = 216/297 (72%), Gaps = 1/297 (0%)

Query: 7   RWLDSDVGYSFRTSPVAIAAALIALVCVVCAVFAGWVSPHNPFDLAALELGDARLPPAWS 66
           R+  SD  Y F    VA+++  + ++ V+ A+ A  ++P NP+DL+++++ DA LPP+W 
Sbjct: 13  RFKQSDFLYYFLRDKVAMSSFAVFVLFVIVAISAPLIAPTNPYDLSSIDIMDAELPPSWM 72

Query: 67  AEGSSKYLLGTDDQGRDILSAVIYGARISLIVGLVSVVLSVVVGVVLGLLAGFFGGWLDS 126
             G+  +LLGTD+QGRDI S ++YG+R+SL +G ++V L + +G+V+GL AG+FGG +DS
Sbjct: 73  EGGNEHFLLGTDEQGRDIFSTILYGSRLSLTIGFLAVGLQLTLGIVIGLSAGYFGGRIDS 132

Query: 127 FLMRVCDVMLSFPPILVALLIAGVGRALFPGAHES-LAFGVLIVSISLTGWVQYARTVRG 185
           FLMR  D+ LSF  ++VA++++ + +A F G   S  A  +L+V I +  W QYARTVR 
Sbjct: 133 FLMRFADIQLSFSTMMVAIIVSAIFKASFGGEFFSQYAVVMLVVIIGVAEWPQYARTVRA 192

Query: 186 STLVERNKEYVQAARVTGVAPMRIMLRHVLPNVLGPVTVLATIQVATAIITEATLSFLGV 245
           S L E+ KEYV+AARV G    RIM RH+LPN L P+ V++T+QVA AI++EA LSFLG+
Sbjct: 193 SVLAEKKKEYVEAARVMGFKAPRIMFRHILPNCLSPILVISTVQVANAIMSEAALSFLGL 252

Query: 246 GVPPTSPSLGTLISIGNQYLFSGEWWITVFPGLMLVLIALSVNLLGDWLRDALNPRL 302
           G+P   PSLG+LISIG  Y+FSG WWIT FPG++LVL+ L +NLLGDWLRD  NP++
Sbjct: 253 GLPVDQPSLGSLISIGFTYIFSGAWWITAFPGIVLVLLVLVINLLGDWLRDVFNPKI 309