Pairwise Alignments

Query, 303 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 316 a.a., peptide transport system permease from Sinorhizobium meliloti 1021

 Score =  332 bits (852), Expect = 5e-96
 Identities = 163/298 (54%), Positives = 217/298 (72%), Gaps = 1/298 (0%)

Query: 7   RWLDSDVGYSFRTSPVAIAAALIALVCVVCAVFAGWVSPHNPFDLAALELGDARLPPAWS 66
           R   SDV +SF  S  A+ +A +  + ++ A+FA  ++P NP+D AAL++  A LPP W 
Sbjct: 19  RLRQSDVWWSFTHSKTAMFSAALLAILILTALFAPLIAPQNPYDGAALDMWKAELPPVWE 78

Query: 67  AEGSSKYLLGTDDQGRDILSAVIYGARISLIVGLVSVVLSVVVGVVLGLLAGFFGGWLDS 126
             G   YLLGTD QGRD+LSA++YG RIS+++G+ SV LS+++G+  GL+AG+FGG++D+
Sbjct: 79  EGGEWPYLLGTDTQGRDMLSAILYGTRISIVIGIASVALSLLIGMSAGLIAGYFGGFIDN 138

Query: 127 FLMRVCDVMLSFPPILVALLIAGVGRALFP-GAHESLAFGVLIVSISLTGWVQYARTVRG 185
            LMR  DV LS P ILVA+L++ V R + P    E  A  VLI++ISL+ WVQYARTVR 
Sbjct: 139 LLMRFGDVTLSIPTILVAILVSTVVRQMLPVSLREVGASAVLILAISLSAWVQYARTVRA 198

Query: 186 STLVERNKEYVQAARVTGVAPMRIMLRHVLPNVLGPVTVLATIQVATAIITEATLSFLGV 245
             +VE  K+YV AAR+ GV   RIM  H+LPN L P+ V AT+    AI+TEATLSFLG+
Sbjct: 199 QAIVETGKDYVSAARLIGVPARRIMANHILPNTLTPIMVAATLNFGMAILTEATLSFLGI 258

Query: 246 GVPPTSPSLGTLISIGNQYLFSGEWWITVFPGLMLVLIALSVNLLGDWLRDALNPRLR 303
           G+PP+ PSLGTLI IGNQ+LFSG WWI +FP + L L+ ++VN+LGDWLRDALNP+LR
Sbjct: 259 GMPPSQPSLGTLIRIGNQFLFSGSWWIVLFPVIQLCLLVVAVNMLGDWLRDALNPKLR 316