Pairwise Alignments

Query, 303 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 291 a.a., oligopeptidemurein peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  224 bits (571), Expect = 2e-63
 Identities = 118/284 (41%), Positives = 174/284 (61%), Gaps = 9/284 (3%)

Query: 18  RTSPVAIAAALIALVCVVCAVFAGWVSPHNPFDLAALELGDARLPPAWSAEGSSKYLLGT 77
           R  PV  A+ L+    ++ A+ A  ++P NP+D   +   +A  PP     G   YLLGT
Sbjct: 13  RHGPVLTASKLLLASYILVAIAAPLIAPQNPYDPLQIYGWEASSPPGTRGSGGYLYLLGT 72

Query: 78  DDQGRDILSAVIYGARISLIVGLVSVVLSVVVGVVLGLLAGFFGGWLDSFLMRVCDVMLS 137
           D  GRDI+S ++YG RISL+V +VS  L+ ++G+  G+ A +FG W+D  +MR+ D+ LS
Sbjct: 73  DGLGRDIVSTILYGLRISLVVSIVSSALAALIGLTAGVSAAYFGKWVDIAIMRLVDLQLS 132

Query: 138 FPPILVALLIAGVGRALFPGAHESLAFGVLIVSISLTGWVQYARTVRGSTLVERNKEYVQ 197
            P IL+AL+       L PG         +I+++ +  W  YAR  RG  L E NK Y+ 
Sbjct: 133 LPTILIALIAIVT---LGPGIDR------IILALIIAQWATYARIARGVALSEANKPYMD 183

Query: 198 AARVTGVAPMRIMLRHVLPNVLGPVTVLATIQVATAIITEATLSFLGVGVPPTSPSLGTL 257
           AAR+  +   RI+ RH+LPN + P   L  I+V  A+  EATLSFLG+GVP   PSLG+ 
Sbjct: 184 AARLMRLPTSRIIFRHLLPNSIAPAVTLIPIEVGHAVALEATLSFLGLGVPIDKPSLGSA 243

Query: 258 ISIGNQYLFSGEWWITVFPGLMLVLIALSVNLLGDWLRDALNPR 301
           ++ G QYL +G++WI++FPGL L  +  S+NL+G+ +R +L+PR
Sbjct: 244 VANGFQYLLTGQYWISLFPGLALFGLIASINLVGEDVRRSLDPR 287