Pairwise Alignments

Query, 527 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 491 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  163 bits (413), Expect = 1e-44
 Identities = 151/525 (28%), Positives = 242/525 (46%), Gaps = 58/525 (11%)

Query: 15  ALGAVSMVAS---AQTIRIANQGDALSLDPHSLNESLQLSVTANVYETLVGRNKDLSLAP 71
           A G   + AS   AQ+I +A   +  +LDP   ++  +  V  N+YE L+ R     L P
Sbjct: 9   AAGLAVLFASTSWAQSITVAIGSEPSTLDPQLRDDGGERQVNDNIYEALMARTATGDLVP 68

Query: 72  -LLATSWKQTSPNVWRFELRKGVVFHDGTPFTADDVVFSFARA--QGDGSDMRATLSDIK 128
            L A +  Q     W+F+LR+G+ FH+G PF AD VV S  R     + S+  A L  + 
Sbjct: 69  GLAADAPTQVDARTWQFKLREGIKFHNGEPFNADAVVASVLRVIDPANNSEQMAYLGPLS 128

Query: 129 AVRKVGDLAVEIETNGPFPILPDVISLTMIMSKKWCEENQ--ATKPVDRRKGIENTASFK 186
              KV DLAV I T+ P PILP  +    ++   + +     A KPV             
Sbjct: 129 GAEKVDDLAVRIITSAPDPILPARMYWLKMVPAAYSKNATAIAEKPV------------- 175

Query: 187 ANGTGPFRVRERQPNVRTVFTRNGTYWGKIDGNAQEVIFTPIANPATRVAALVSGEVDVM 246
             GTGP++            T N  YWG  +    +V +  ++   TR++ LV+GE DV+
Sbjct: 176 --GTGPYKFGTWDRGNSITMTANTDYWGG-EPQIDDVTYRFVSEAGTRLSGLVAGEFDVV 232

Query: 247 EPVPVQDIARINAAPNARVITGPEMRTIFLGMDQKRDELQYSNVKGKNP-FKDKRVRQAF 305
             + + + A  ++ P A+ ++G E   I LG+D              NP  KD RVR+A 
Sbjct: 233 VNL-LPEFA--DSVPQAKSVSGLETSVIILGVD--------------NPAVKDVRVRRAL 275

Query: 306 YQAIDIAGIQRTVMRG-ASRPTALLVGPGINGWTAEQDKRLPYDVEAAKKLLTEAGYPNG 364
             AID   +  ++  G A   T  LV PG  G+  E  +  PYD + AKKL+ EAG   G
Sbjct: 276 NMAIDRHALAESLFAGNAKVTTGQLVLPGAFGYN-ESLENWPYDPQGAKKLIAEAG-AAG 333

Query: 365 FEVSLNCPNDRYVNDGQICQSVASNLAKIGVKINLVAETKGTYFPKVL---RRDTSFYML 421
             + L     R++ D ++ ++VA+   ++G+K+N+       Y  ++     R  S+++L
Sbjct: 334 TTIDLVGEAGRWLKDRELIEAVAAYWTEVGLKVNVEILEFSVYLDRIFDMGNRPDSYFVL 393

Query: 422 GWTPTTYDSHNALSSLTSCPDDKGTGQFNLGAYCNPK-LDELTKKIQSEGDKDKRNEMIK 480
             +   +D+   ++       + G G    GA  + K L E  +  +SE D +KR     
Sbjct: 394 N-SNELFDADREMAFAY----EPGQG----GASNSDKALGEAIRAARSEVDGEKRKAAYA 444

Query: 481 EAFKIHADDVGHLPLHQQSLAWGVSKKVELVQLADNFMYFKWMSI 525
              K   D+   +PL      +G+S+K+E     D+ +  + M +
Sbjct: 445 VITKKLHDEAYDVPLLNHQDIYGMSEKMEWQPRVDSKIIVREMKV 489