Pairwise Alignments

Query, 527 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 508 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  135 bits (339), Expect = 5e-36
 Identities = 131/517 (25%), Positives = 212/517 (41%), Gaps = 59/517 (11%)

Query: 7   VAAAAVLCALGAVSMVASAQTIRIA---NQGDALSLDPHSLNESLQLSVTANVYETLVGR 63
           +A     C+ GA    A    +R+    + G+  ++DP +L  +  +     VYE LV R
Sbjct: 11  LAVTMAACSFGATVAFAQEGCVRVLGYESDGEKQTMDPAALIGTDSVYHIRAVYEPLVDR 70

Query: 64  NKDLSLAPLLATSWKQTSPNV-WRFELRKGVVFHDGTPFTADDVVFSFAR----AQGDGS 118
           +  +   P LA SW+  +    W F LRKGV FHDG+ F A DVV+S+ R    A   G 
Sbjct: 71  SNTMQPVPALAESWESNADATEWTFHLRKGVKFHDGSDFDAKDVVYSYRRLLDPAVSPGG 130

Query: 119 DMRATLSDIKAVRKVGDLAVEIETNGPFPILPDVISLTMIMSKKWC-EENQATKPVDRRK 177
                  D   +  + D  V  +   P      V+ L M+++ K+     +  K  D R 
Sbjct: 131 FSTLAFLDADGITAIDDHTVRFKVKEP------VVELPMLIATKYALMVPEGAKSEDLR- 183

Query: 178 GIENTASFKANGTGPFRVRERQPN-VRTVFTRNGTYWGKIDGNAQEVIFTPIANPATRVA 236
                   K NGTGPF       N    V  RN TYW      ++ +  T    P +R++
Sbjct: 184 -------VKGNGTGPFMQETFTINGAVRVMRRNPTYWRAGLPKSECLEITTSLEPTSRLS 236

Query: 237 ALVSGEVDVMEPVPVQDIARINAAPNARVITGPEMRTIFLGMDQKRDELQYSNVKGKNPF 296
           AL+SG VD+   V    +  +   P   +   P   ++++ +                PF
Sbjct: 237 ALLSGTVDLSLTVDPASLITLKDNPAVELAATPGATSLYIAV-----------WTDTPPF 285

Query: 297 KDKRVRQAFYQAIDIAGIQRTVMRGASR-------PTALLVGPGINGWTAEQDKRLPYDV 349
              +VR+A    +D   I  TV+ G          P +   G G    TA        D+
Sbjct: 286 DSVKVREAMKLVMDRQKILDTVLLGYGEVGADTPIPPSSPFGLGTPAKTA--------DI 337

Query: 350 EAAKKLLTEAGYPNGFEVSLNCPNDRYVNDGQICQSVASNLAKIGVKINLVAETKGTYFP 409
           E A  LL EAG+P+G +  L   +D Y     + Q  A   A  G+++N++      Y+ 
Sbjct: 338 EKATALLAEAGHPDGIDFDL-YTSDSYPGMMLLAQVYAQMAAPAGIRVNVITSPAEGYWD 396

Query: 410 KVLRRDTSFYMLGWTPTTYDSHNALSSLTSCPDDKGTGQFNLGAYCNPKLDELTKKIQSE 469
            +  +  +  ++ +T     +     SL S        ++N   +     D L  K    
Sbjct: 397 TIWLKKPA--VISYTSARPPAEALTLSLNS------KSEWNETHWTRDDFDALVVKAGQT 448

Query: 470 GDKDKRNEMIKEAFKIHADDVGHLPLHQQSLAWGVSK 506
            D+ +RN++ ++A +I AD+ G +     S+  G+ K
Sbjct: 449 ADEKQRNDLYRDAQRIVADEGGMILPVFSSVVAGLRK 485