Pairwise Alignments

Query, 527 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 531 a.a., oligopeptidemurein peptide ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

 Score =  208 bits (529), Expect = 5e-58
 Identities = 157/482 (32%), Positives = 226/482 (46%), Gaps = 31/482 (6%)

Query: 28  IRIANQGDALSLDPHSLNESLQLSVTANVYETLVGRNKDLSLAPLLATSWKQTSPNVWRF 87
           +RIA     ++LDP   N +   S+ +++YE LV ++ +L L P LATSW+  S   W F
Sbjct: 35  LRIATSYKLMTLDPQYANLNENTSLLSHIYERLVYQDDNLELKPGLATSWRPLSDTQWAF 94

Query: 88  ELRKGVVFHDGTPFTADDVVFSFARAQG----DGSDMRATLSDIKAVRKVGDLAVEIETN 143
           +LR  V FHDG+ F ADDVV++  R +          R+ +S IK+V     L V IET+
Sbjct: 95  KLRDKVRFHDGSAFDADDVVYTIERIRDFLKPPSGGFRSYVSGIKSVSAPDPLTVLIETD 154

Query: 144 GPFPILPDVISLTMIMSKKWCEENQATKPVDRRKGIENTASFKA----NGTGPFRVRERQ 199
           G  P LP   S   +M++               KG E T +  A    NGTGP+R     
Sbjct: 155 GAVPNLPLFFSSLFVMNRP-------------SKGFETTENLNAGHPPNGTGPYRFESWS 201

Query: 200 PNVRTVFTRNGTYWGKIDGNAQEVIFTPIANPATRVAALVSGEVDVMEPVPVQDIARINA 259
                   RN  YWG       +V F  I NPA RVAAL +GEVDV   +P +D+A +  
Sbjct: 202 SGESLRLARNDDYWGGKPA-WSKVTFRVIENPAARVAALSTGEVDVAHAIPARDVASLKQ 260

Query: 260 APNARVITGPEMRTIFLGMDQKRDELQYSNVKG----KNPFKDKRVRQAFYQAIDIAGIQ 315
              A++ +    R  F+  D  RD L     K      NPFK+  VR+A   A D   + 
Sbjct: 261 R-GAKIASVGAARVNFVQFDVARDTLPGVTDKSGEPIANPFKNPLVRRALTLATDRGILV 319

Query: 316 RTVMRGASRPTALLVGPGINGWTAEQDKRLPYDVEAAKKLLTEAGYPNGFEVSLNCPNDR 375
             ++ G     A +   G+ G +A      P + + AK LL +AG+P+GF + L  P  R
Sbjct: 320 DKILAGYGTAAAQVFPNGLPGTSANLLPEAP-NYDEAKMLLAKAGFPDGFNLVLAGPAGR 378

Query: 376 YVNDGQICQSVASNLAKIGVKINLVAETKGTYFPKVLRRDTSFYMLGWTPTTYDSHNALS 435
           Y  D +  Q+VA + A+IGV     A     +  K    D   +  G +    D    L 
Sbjct: 379 YPGDAESLQAVAQSWARIGVNAQPAAAPFSVFNTKRAAGDYGVWYGGTSGEAVDI--ILH 436

Query: 436 SLTSCPD-DKGTGQFNLGAYCNPKLDELTKKIQSEGDKDKRNEMIKEAFKIHADDVGHLP 494
           SL + PD ++GTG  N G Y N   D +    +S     +RN  + +A ++   D   +P
Sbjct: 437 SLLASPDPERGTGALNFGKYRNEAFDAMLAGAESIAVGPERNAALAQATELVMADQPIIP 496

Query: 495 LH 496
           L+
Sbjct: 497 LY 498