Pairwise Alignments

Query, 527 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 521 a.a., peptide ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

 Score =  165 bits (418), Expect = 3e-45
 Identities = 154/514 (29%), Positives = 226/514 (43%), Gaps = 65/514 (12%)

Query: 5   KNVAAAAVLCALGAVSMVASAQT----IRIANQGDALSLDPHSLNESLQLSVTANVYETL 60
           ++  A A L   GA +  A+AQT    + +    +  SLDPH++  +    +  NVY+ L
Sbjct: 6   RSAIALAALAFAGAAAAPAAAQTPPDVLVVGQIAEPQSLDPHTVTATNDFRILVNVYDGL 65

Query: 61  VGRNKD--LSLAPLLATSWKQTSPN-VWRFELRKGVVFHDGTPFTADDVVFSFARAQGDG 117
           V R KD  L + P LA SWK +     + F LR+GV FHDG+ F A+ V F+F R     
Sbjct: 66  V-RFKDGTLEVEPALAESWKISDDGKTYTFTLRQGVKFHDGSNFDAEAVKFNFDRMLKKD 124

Query: 118 SDMRAT--------LSDIKAVRKVGDLAVEIETNGPF-PILPDVISLTMIMSKKWCEENQ 168
                T         + +KAV  + +  VE + +  F P L ++   T ++      E  
Sbjct: 125 HPFYDTGPFPLSFNFASVKAVNVLDEHTVEFKLSEAFAPFLSNLAYPTGLIVSPVAVE-- 182

Query: 169 ATKPVDRRKGIENTASFKANGTGPFRVRERQPNVRTVFTRNGTYWGKIDGNAQEVIFTPI 228
                  + G E   S   +GTGPF+  E   N R V  RN  YW       Q V+F PI
Sbjct: 183 -------KHGKEYGRS--PSGTGPFKFVEWLSNQRVVVERNPDYWDSA-AKLQAVVFRPI 232

Query: 229 ANPATRVAALVSGEVDVMEPVPVQDIARINAAPNARVI--TGPEMRTIFLGMDQKRDELQ 286
            +  TRVA +++G +DVM  VP  ++A      N  V    GP +    L   Q      
Sbjct: 233 TDANTRVAEMMAGGIDVMVEVPPDNLATFEQDANFAVAEQAGPHVWFTILNTKQ------ 286

Query: 287 YSNVKGKNPFKDKRVRQAFYQAIDIAGIQRTVMRGASRPTALLVGPGINGWTAEQDKRLP 346
                   PF DKRVRQA   A++   +   V+RG +   A  + P  N W     +   
Sbjct: 287 -------GPFADKRVRQAANYAVNKQTLVDDVLRGTATVAAGPIPPAFN-WVESSVEPYA 338

Query: 347 YDVEAAKKLLTEAGYPNGFEVSLNCPNDRYVNDG--------QICQSVASNLAKIGVKIN 398
           +D E AK LL EAG  N  +V+       YV +G         +  ++ ++L  +G K+ 
Sbjct: 339 HDPEKAKALLAEAGVENP-QVTF------YVTEGGSGMLDPITMGAAIQADLQAVGFKVK 391

Query: 399 LVAETKGTYFPKV---LRRDTSFYMLGWTPTTYDSHNALSSLTSCPDDKGTGQFNLGAYC 455
           +      T+  +V   L        + W     D+   L+  T    DK  G FN G Y 
Sbjct: 392 IETYEWNTFLGRVNPGLEGKADMAEMAWMTNDPDTVPYLTLRTDAMPDK--GGFNSGYYS 449

Query: 456 NPKLDELTKKIQSEGDKDKRNEMIKEAFKIHADD 489
           NP+LDEL +K +   D+ +R ++  E   I  DD
Sbjct: 450 NPQLDELLEKARRSTDQAERGKLYGEVQSIVHDD 483