Pairwise Alignments

Query, 527 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 528 a.a., ABC transporter, extracellular solute-binding protein from Phaeobacter inhibens DSM 17395

 Score =  136 bits (343), Expect = 2e-36
 Identities = 138/520 (26%), Positives = 221/520 (42%), Gaps = 29/520 (5%)

Query: 4   KKNVAAAAVLCALGAVSMVASAQ----TIRIANQGDALSLDPHSLNESLQLSVTANVYET 59
           +K VAAAAVL    A++  A AQ     +  A    +  +DP   + +  + +  ++++T
Sbjct: 3   RKLVAAAAVLTT--ALTGPALAQDRGGVLNFARYDGSTLIDPIYADRNPDIWMVGSLFDT 60

Query: 60  LVGRNKD-LSLAPLLATSWKQTSPNVW-RFELRKGVVFHDGTPFTADDVVFSFARAQ-GD 116
           L+  ++D  S+ P LA S+  +         LR+G+ F DGTP T +DVVFS  RA+  D
Sbjct: 61  LLHPSQDGNSVVPGLAESYAVSDDGTTVTLTLREGIKFSDGTPLTGEDVVFSLNRARDAD 120

Query: 117 GSDMRATLSDIKAVRKVGDLAVEIETNGPFPILPDVISL--TMIMSKKWCEENQATKPVD 174
            S     L  +  V   G+  + +  + P P +  +++   T ++SK W E   A    D
Sbjct: 121 LSPWAGLLGTLDTVANTGN-EITLTLSAPDPTILSMLATFTTGVVSKAWFEA--ADGATD 177

Query: 175 RRKGIENTASFKAN-GTGPFRVRERQPNVRTVFTRNGTYW-----GKIDGNAQEVIFTPI 228
           + K     A+  A  GTGPF +   +      F  N  YW     GK       V F  I
Sbjct: 178 QEKSAAIFAAKDAGVGTGPFYLCGFEQGTSMDFCANEHYWRAGADGKPLPYLDGVHFEII 237

Query: 229 ANPATRVAALVSGEVDVMEPVPVQDIARINAAPNARVITGPEMRTIFLGMDQKRDELQYS 288
            + ATR+  L +GE+D  E +P   +A + A P   +   P  R I+  ++ +      S
Sbjct: 238 PDDATRILKLQAGEMDAAEFIPFSRVAELEADPKIDMNLFPSTRIIYSPINTRPTRADGS 297

Query: 289 NVKGKNPFKDKRVRQAFYQAIDIAGIQRTVMRGASRPTALLVGPGINGWTAEQDKRLPYD 348
                NP  D RVRQA   A +   +   V++GA +P    +         E D    YD
Sbjct: 298 ----ANPLADARVRQALNYATNKKALIGLVLQGAGKPMTSPLMAAATQLATETDPLYGYD 353

Query: 349 VEAAKKLLTEAGYPNGFEVSLNCPNDRYVNDGQICQSVASNLAKIGVKINLVAETKGTYF 408
           ++ AK L+ EAG   G E++         +D  I  ++    A +G+++ +      T  
Sbjct: 354 MDKAKALIAEAGLAAGTEITFTTLAGS-ADDSTIFAALQQMWAPLGIQLKVEQVDNATRG 412

Query: 409 PKVLRRDTSFYMLGWTPTTYDSHNALSSLTSCPDDKGTGQFNLGAYCNPKLDELTKKIQS 468
            K    +   +  GW     D       L   P  K  G      + N K + L +   +
Sbjct: 413 AKNRSGEFDIHTYGWVNDVNDPSQVTGWLGYFPTAKAVGT----GWENEKFNSLFEASAT 468

Query: 469 EGDKDKRNEMIKEAFKIHADDVGHLPLHQQSLAWGVSKKV 508
           E D D R     E   I+A+    L +++   A  +S+ V
Sbjct: 469 EMDADSRAGQYAEMQSIYAEAAPLLFMYETPFAVALSETV 508