Pairwise Alignments

Query, 326 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 325 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  296 bits (759), Expect = 4e-85
 Identities = 141/324 (43%), Positives = 219/324 (67%)

Query: 1   MIAFVLRRLIQAVIVMIAVAFIAFLLFQYVGDPVVFLLGQDAKPDQIRELRAALGLDQPF 60
           M +F+++RL QA+IVM  ++ +AF +   +GDP+  L+GQ     + + LR  LGL+ PF
Sbjct: 1   MFSFLVKRLYQALIVMFVISLVAFAIQDNLGDPLRELVGQSVSEAERQALRDELGLNDPF 60

Query: 61  FVQFWHFLVNAAQGEFGLSLRQGAKVSRLIGERFPATLELALVAAVLALFIGIPMGVYTA 120
            +++  F+  A QG+ G S         +I ++  ATLEL   A ++ +   IP+GVY+A
Sbjct: 61  IIKYSRFVTAAVQGDLGTSYFFKRPALEVIFDKLVATLELVFGATLIIIVFSIPLGVYSA 120

Query: 121 LRRGTFMSQFFMTVSLLGVSLPTFLIGILLILVFAVTLGWFPSFGRGETVKFGWWTSGLF 180
           +   +  ++  M  S +G+S+P FL  I+L+ VF++ LGW PS+GRGETV    W SG F
Sbjct: 121 IHPKSLFTKIVMAGSSIGISIPVFLTAIMLMYVFSIELGWLPSYGRGETVNLLGWESGFF 180

Query: 181 SVDGWQHIVLPAVTLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLSNRAIHFGHALK 240
           ++DG +H+VLP++ LA   L L +RLVR+EMLEVL ++YIKFA+A+GL    I++ HALK
Sbjct: 181 TLDGLRHLVLPSIALASIMLPLFIRLVRSEMLEVLSSEYIKFAQAKGLPLNKIYYQHALK 240

Query: 241 NTLVPVMTITGLQLGGLIAFAIITESVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALIF 300
           NT++PV+T+ G+Q+G ++A+ I+TE+VFQWPG G LF++A+   D P++ AY+  + LIF
Sbjct: 241 NTMLPVLTVGGVQIGTMVAYTILTETVFQWPGTGFLFLEAINRVDTPLITAYVIFVGLIF 300

Query: 301 VVINLVVDLLYFVVDPRLRVGKAG 324
           VV N +VDLLY +++P + +   G
Sbjct: 301 VVTNTIVDLLYGLINPTVNLTGKG 324