Pairwise Alignments

Query, 326 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 304 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  211 bits (537), Expect = 2e-59
 Identities = 119/319 (37%), Positives = 178/319 (55%), Gaps = 16/319 (5%)

Query: 1   MIAFVLRRLIQAVIVMIAVAFIAFLLFQYVGDPVVFLLGQDAKPDQIRELRAALGLDQPF 60
           M+ ++ RR   +VI +I +  + F L +  GDP    L  D+  +  +      GLDQP 
Sbjct: 1   MLGYIGRRAYHSVISVIGLLTLVFFLTRLTGDPSALYLPLDSSLEARQAFARLNGLDQPI 60

Query: 61  FVQFWHFLVNAAQGEFGLSLRQGAKVSRLIGERFPATLELALVAAVLALFIGIPMGVYTA 120
           +VQF+ +L N    +FG SLRQ      +  E FPATL+LALVA  LA  + I +G   A
Sbjct: 61  YVQFFQYLQNLMSLDFGQSLRQNRSAIEVALEAFPATLKLALVAMSLATVLAIVVGALAA 120

Query: 121 LRRGTFMSQFFMTVSLLGVSLPTFLIGILLILVFAVTLGWFPSFGRGETVKFGWWTSGLF 180
            R G+   +    VSL G S P F I I+ ILVFAV LG  P+ G G  +          
Sbjct: 121 ARPGSLFDRIAGLVSLAGASTPDFWIAIVGILVFAVGLGILPTSGTGTAL---------- 170

Query: 181 SVDGWQHIVLPAVTLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLSNRAIHFGHALK 240
                 H ++P V L +    L++++VR  M+  L + +IK A A+G+  R I FGHAL+
Sbjct: 171 ------HWIMPIVVLMLRPFGLLVQVVRGTMISALASPFIKTAHAKGMKRRKIIFGHALR 224

Query: 241 NTLVPVMTITGLQLGGLIAFAIITESVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALIF 300
           N+L+PV+T+ G    GLI  A++ E++F WPG+G L I ++   D  V+ + + + A+  
Sbjct: 225 NSLLPVITVAGDLATGLINGAVVVETIFGWPGIGKLMIDSIIQRDFAVVQSTILVTAIAI 284

Query: 301 VVINLVVDLLYFVVDPRLR 319
            ++N+ +DLLY V+DPR+R
Sbjct: 285 FIVNIAIDLLYAVLDPRIR 303