Pairwise Alignments

Query, 326 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 306 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  213 bits (542), Expect = 5e-60
 Identities = 120/321 (37%), Positives = 181/321 (56%), Gaps = 17/321 (5%)

Query: 1   MIAFVLRRLIQAVIVMIAVAFIAFLLFQYVGDPVVFLLGQDAKPDQIRELRAALGLDQPF 60
           M+ F+LRRL Q V+V+  V    F++ + VGDPV  +L   A   Q       +GLDQP 
Sbjct: 1   MLEFILRRLFQGVLVVFGVTATVFVVTRLVGDPVALMLPLSATEAQRAAFAQQIGLDQPI 60

Query: 61  FVQFWHFLVNAAQGEFGLSLRQGAKVSRLIGERFPATLELALVAAVLALFIGIPMGVYTA 120
             QF  F+ + A  +FG SL Q      ++ ER P TL L       A+ + IP+G  +A
Sbjct: 61  ATQFLRFVGDIATLDFGNSLWQRRPAIEVVFERLPNTLLLIAAGLGAAVMLSIPLGAVSA 120

Query: 121 LRRGTFMSQFFMTVSLLGVSLPTFLIGILLILVFAVTLGWFPSFGRGETVKFGWWTSGLF 180
           LR G  + +  M+V LLG+++P F +G++ I++FAVTL W P+ G G             
Sbjct: 121 LRPGGLVDRLTMSVGLLGLAMPQFWLGLVAIMIFAVTLRWLPTSGMGTAA---------- 170

Query: 181 SVDGWQHIVLPAVTLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLSNRAIHFGHALK 240
                 H+VLPA+TLA+  L     +VRA M++ L   Y+K ARA+GL    I   H L+
Sbjct: 171 ------HLVLPALTLALTPLARFTMMVRASMIDELNKPYVKTARAKGLGLTRILRVHTLR 224

Query: 241 NTLVPVMTITGLQL-GGLIAFAIITESVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALI 299
           N LVP ++I+G +L   L  + ++ E+VF WPG+GL  +QA+   D+ +M A + +IA +
Sbjct: 225 NILVPFLSISGWELIATLSGYTVVVETVFAWPGLGLTAVQAIQRGDLFLMQAIVFVIAFL 284

Query: 300 FVVINLVVDLLYFVVDPRLRV 320
            V+I + +D+L   VDPR+ +
Sbjct: 285 IVLIGIALDILSKAVDPRMEL 305