Pairwise Alignments

Query, 326 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 325 a.a., oligopeptidemurein peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  251 bits (641), Expect = 2e-71
 Identities = 135/321 (42%), Positives = 196/321 (61%), Gaps = 1/321 (0%)

Query: 1   MIAFVLRRLIQAVIVMIAVAFIAFLLFQYVGDPVVFLLG-QDAKPDQIRELRAALGLDQP 59
           MI+  L RL QA +++IA++ I F+    VG+PV  ++  + A P+ I     ALGLDQP
Sbjct: 3   MISVALGRLGQAFLLLIAMSLIGFIGIHSVGNPVFNVVNIETATPEDIHAATIALGLDQP 62

Query: 60  FFVQFWHFLVNAAQGEFGLSLRQGAKVSRLIGERFPATLELALVAAVLALFIGIPMGVYT 119
            + Q+  F+ N   G FG S         L+  + PATLELA +A ++A  +G  +G+  
Sbjct: 63  IWRQYLAFIGNVVSGNFGTSYIYHLPAFELVMSKLPATLELASIAMLIAAPLGTGLGLLA 122

Query: 120 ALRRGTFMSQFFMTVSLLGVSLPTFLIGILLILVFAVTLGWFPSFGRGETVKFGWWTSGL 179
             R GT   +  +  S+  +S+P+F + ++LILV A+  GWFPS GRG T  F       
Sbjct: 123 GRRSGTLFDRTMVKASVSALSIPSFWLAMMLILVGAILTGWFPSGGRGLTASFLGQEWSF 182

Query: 180 FSVDGWQHIVLPAVTLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLSNRAIHFGHAL 239
            + +G  H+VLPA+ LAI  + LI RL R+  +EV   DY +F RA+GLS R I F H L
Sbjct: 183 LTANGLWHLVLPALALAIPNIALIARLSRSGTIEVENLDYTRFCRAKGLSARRILFRHTL 242

Query: 240 KNTLVPVMTITGLQLGGLIAFAIITESVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALI 299
            N  VP++TI GLQ GG++AFA++ E++F WPG+G L I ++   D PV+ A L +IA+ 
Sbjct: 243 PNISVPIVTIIGLQFGGMLAFAVVVETIFSWPGVGKLLIDSIQLLDRPVVMATLTVIAVA 302

Query: 300 FVVINLVVDLLYFVVDPRLRV 320
           FV +N +VDL Y V+DPR+R+
Sbjct: 303 FVALNALVDLFYAVLDPRVRL 323