Pairwise Alignments

Query, 326 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 325 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  292 bits (747), Expect = 9e-84
 Identities = 148/321 (46%), Positives = 212/321 (66%), Gaps = 1/321 (0%)

Query: 1   MIAFVLRRLIQAVIVMIAVAFIAFLLFQYVGDPVVFLLGQDAKPDQIRELRAALGLDQPF 60
           M AF++RR+ QA++VM  ++FI F + Q VGDP   ++G      +   LR  LGL+ P+
Sbjct: 1   MFAFIVRRVAQALLVMFIISFIGFAIKQSVGDPTREMVGVSVSVKEREALREKLGLNDPY 60

Query: 61  FVQFWHFLVNAAQGEFGLSLRQGAKVSRLIGERFPATLELALVAAVLALFIGIPMGVYTA 120
            VQ+  F  NA QG+ G S         +I  + PATLEL  VA  + + I +P+GVY+A
Sbjct: 61  LVQWARFTKNAVQGDLGTSYFYRKPALDVILAKAPATLELVFVAQCIIVLISVPVGVYSA 120

Query: 121 LRRGTFMSQFFMTVSLLGVSLPTFLIGILLILVFAVTLGWFPSFGRGETVK-FGWWTSGL 179
            R  + +S+ FM +S++GVS+P FL  I +I +F+V LGW PSFGRG  V+ F  WTS L
Sbjct: 121 CRPRSVLSRLFMGISIVGVSVPVFLTAIFMIYIFSVHLGWLPSFGRGNPVEIFPGWTSVL 180

Query: 180 FSVDGWQHIVLPAVTLAIFQLTLIMRLVRAEMLEVLRTDYIKFARARGLSNRAIHFGHAL 239
            +   ++HI+LP++ L+   L L +RL+RAEM E L T+Y+KFARA+GL    +   HA 
Sbjct: 181 TTWSNFKHIILPSIALSSIMLPLFIRLIRAEMKEALETEYVKFARAKGLPEWRVVMVHAF 240

Query: 240 KNTLVPVMTITGLQLGGLIAFAIITESVFQWPGMGLLFIQAVTFADIPVMAAYLCLIALI 299
           KNTL+PV+T+ G+QLG +IAF I+TE+VFQW GMG +F++AV  AD  ++ AYL  +  I
Sbjct: 241 KNTLLPVITVGGVQLGIMIAFTILTETVFQWQGMGFMFVEAVERADTALLVAYLIFVGAI 300

Query: 300 FVVINLVVDLLYFVVDPRLRV 320
           FV +N VVDL+Y  V+P +R+
Sbjct: 301 FVTVNTVVDLIYGFVNPMVRI 321