Pairwise Alignments

Query, 463 a.a., General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) from Variovorax sp. SCN45

Subject, 562 a.a., type IV-A pilus assembly ATPase PilB from Vibrio cholerae E7946 ATCC 55056

 Score =  332 bits (850), Expect = 3e-95
 Identities = 193/446 (43%), Positives = 266/446 (59%), Gaps = 35/446 (7%)

Query: 46  GVQTFEVLADGPLAQR-ISAAYAQGESSAAAVVSEVQNDADLSRMMQ----ELPAVEDLL 100
           G+Q    LAD    Q  I   Y +    AA    E+  D +L+ +++    EL ++EDL 
Sbjct: 118 GLQVELALADHRALQAAIRRLYGRSIQGAANQGKEISQD-ELANLVKVSDDELQSIEDL- 175

Query: 101 ASAGDAPIIRMLNALLTQAARDGASDIHIEPYERTSSVRFRIDGTLREVVQPNRALHAAL 160
            S  D+P+ R +N +L  A R GASDIH EPYE    +R R DG L E  QP   L   L
Sbjct: 176 -SQDDSPVSRFINQVLLDAVRKGASDIHFEPYENQYRIRLRCDGILVETQQPASHLSRRL 234

Query: 161 ISRLKIMADLDISEKRLPQDGRISLRIGT-RAVDVRVSTLPSAHGERAVLRLLDKSESKL 219
            +R+KI++ LDI+E+RLPQDGRI LR+    A+D+RVSTLP+  GE+ VLRLLD S + L
Sbjct: 235 AARIKILSKLDIAERRLPQDGRIKLRLSRDTAIDMRVSTLPTLWGEKIVLRLLDSSAANL 294

Query: 220 TLESVGMQGDTLDRFEKLISQPHGIILVTGPTGSGKTTTLYAALARLDASRSNIMTVEDP 279
            ++ +G        +   + +P G+IL+TGPTGSGKT +LY  L  L+ S+ NI T EDP
Sbjct: 295 DIDKLGYNPQQKQLYLNALKRPQGMILMTGPTGSGKTVSLYTGLRILNTSQINISTAEDP 354

Query: 280 IEYELPGVGQTQINAKIELTFAKALRAILRQDPDVIMIGEIRDFETAQIAIQASLTGHLV 339
           +E  L G+ Q Q+  KI   FA+ALR+ LRQDPDV+M+GEIRD ETA+IA++A+ TGHLV
Sbjct: 355 VEINLSGINQVQVQPKIGFGFAEALRSFLRQDPDVVMVGEIRDLETAEIAVKAAQTGHLV 414

Query: 340 LATLHTNDSVSAVTRLTDMGVEPFLLSSSLLGVLAQRLVRKVCTACA------------- 386
           L+TLHTN +   V RL +MGVEPF L+SSL  ++AQRL R++C  C              
Sbjct: 415 LSTLHTNSAAETVIRLANMGVEPFNLASSLSLIIAQRLARRLCKHCKIAVRPSALLQSQF 474

Query: 387 ------------GAGCEVCGQTGYQGRTGIFELLVADETVQGLIHSKAAESELLQAGARG 434
                        AGC  C   GY GR GI+E++  +  +   I  +A+  ++ +     
Sbjct: 475 AFQPNEILYEANAAGCNEC-TGGYSGRVGIYEVMAFNTELAEAIMQRASIHQIERLAKAN 533

Query: 435 GLRLMREDGERLVQAGITSRAELLRV 460
           G++ ++E G   ++ GITS AEL RV
Sbjct: 534 GMQTLQESGLEKLREGITSFAELQRV 559