Pairwise Alignments

Query, 412 a.a., General secretion pathway protein F / Type II secretory pathway, component PulF from Variovorax sp. SCN45

Subject, 406 a.a., type II secretion system protein GspF from Vibrio cholerae E7946 ATCC 55056

 Score =  246 bits (627), Expect = 1e-69
 Identities = 141/411 (34%), Positives = 233/411 (56%), Gaps = 7/411 (1%)

Query: 1   MPAYSFEAIDASGQSREGVLEADTARSARSLLRAQALIPLSVKPVGSDHVNGTGQRSGLG 60
           M A+ ++A+DA G+ ++GV+E D AR  R  L+ Q+L+P+ V            Q     
Sbjct: 1   MAAFEYKALDAKGRHKKGVIEGDNARQVRQRLKEQSLVPMEVVETQVKAARSRSQGFAF- 59

Query: 61  RWLGGGKRVFNSTGLAVWTRQLAGLVSSGLPLERALTALTDEAESEPQRNLVASLRAEVN 120
                 KR  ++  LA+ TRQLA LV SG+PLE  L A+ +++E    R ++ ++RA+V 
Sbjct: 60  ------KRGISTPDLALITRQLATLVQSGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVT 113

Query: 121 AGSPFARALSAHSREFSPIYTAVIGAGEQSGNLGLVLDRLADDLEERQALQQKLIGAALY 180
            G   + +L  +   F  ++ +++ AGE+SG+L  VL+RLAD  E RQ ++ KL  A +Y
Sbjct: 114 EGYTLSDSLGDYPHVFDELFRSMVAAGEKSGHLDSVLERLADYAENRQKMRSKLQQAMIY 173

Query: 181 PAIVTLVAIVIVIFLVSYVVPQVAQVFAGTKRSLPFLTTVMLSLSAGVRNYGWWMLGAVV 240
           P ++ + A+ IV FL++ VVP++   F    ++LP  T  +L  S  ++++G  +L  ++
Sbjct: 174 PVVLVVFAVGIVAFLLAAVVPKIVGQFVQMGQALPASTQFLLDASDFLQHWGISLLVGLL 233

Query: 241 LGAIGARLALAQEAFRLKFDAAWLKLPLVGKLARGYNAARFASTLAMLATAGVPILRALQ 300
           +     R  L +   RL++D   + LP++GK+ARG N ARFA TL++  ++ +PIL  ++
Sbjct: 234 MLIYLVRWLLTKPDIRLRWDRRVISLPVIGKIARGLNTARFARTLSICTSSAIPILDGMR 293

Query: 301 AASETLGNRAMRADALDALVLVREGAPLASALAQKKRFPGLVSMFARLGEQTGTLPLMLQ 360
            A + + N+ ++   L A   VREG+ L  AL Q K FP ++      GEQ+G L  ML 
Sbjct: 294 VAVDVMTNQFVKQQVLAAAENVREGSSLRKALEQTKLFPPMMLHMIASGEQSGELEGMLT 353

Query: 361 RAANQLGAEVQRRAMHLATILEPLLIVAMGGVVMLIVLAVMLPIIQLNQFV 411
           RAA+      +        I  P LI  M G+V+ IV+A ++PI+++N  +
Sbjct: 354 RAADNQDNSFESTVNIALGIFTPALIALMAGMVLFIVMATLMPILEMNNLM 404