Pairwise Alignments

Query, 412 a.a., General secretion pathway protein F / Type II secretory pathway, component PulF from Variovorax sp. SCN45

Subject, 405 a.a., type II secretion system protein (RefSeq) from Shewanella loihica PV-4

 Score =  164 bits (414), Expect = 6e-45
 Identities = 112/418 (26%), Positives = 207/418 (49%), Gaps = 21/418 (5%)

Query: 1   MPAYSFEAIDASGQSREGVLEADTARSARSLLRAQALIPLSV--KPVGSDHVNGTGQRSG 58
           MP Y ++  DA G +  G L+A T  +A   L ++A+IPL +    V  +   G+  +S 
Sbjct: 1   MPIYQYKGRDAQGNAVSGRLDATTQSAAADQLLSRAVIPLELVEAKVAREFHLGSLFKSK 60

Query: 59  LGRWLGGGKRVFNSTGLAVWTRQLAGLVSSGLPLERALTALTDEAESEPQRNLVASLRAE 118
           +G              L ++TRQ+  L  SG+P+ RA+  L++ + S+  ++ +  +  +
Sbjct: 61  VGL-----------DELQIFTRQMYSLTRSGIPILRAIAGLSESSHSKRMKDALNDISEQ 109

Query: 119 VNAGSPFARALSAHSREFSPIYTAVIGAGEQSGNLGLVLDRLADDLEERQALQQKLIGAA 178
           + +G P + A++ H   F  ++ ++I  GE +G L     +L+  +E  Q  ++++  A 
Sbjct: 110 LISGRPLSSAMNHHPDVFDALFVSMIHVGENTGKLEDAFIQLSGYIEREQETRRRIKAAM 169

Query: 179 LYPAIVTLVAIVIVIFLVSYVVPQVAQVFAGTKRSLPFLTTVMLSLSAGVRNYGWWMLGA 238
            YP  V +   + ++ L   V+P+ A +FA     LP+ T +++  S    NY + +L A
Sbjct: 170 RYPIFVLMAVALAMVVLNIMVIPKFADLFARFGADLPWATKLLIGTSNFFVNYWYLLLIA 229

Query: 239 VVLGAIGARLALAQEAFRLKFDAAWLKLPLVGKLARGYNAARFASTLAMLATAGVPILRA 298
           +V   +G R     E    ++D   LK+P VG +      +R+  + +M+ +AGVP+ +A
Sbjct: 230 LVGCFVGIRYWHNTEKGEQQWDRWKLKIPAVGSIIERSTLSRYCRSFSMMLSAGVPMTQA 289

Query: 299 LQAASETLGNRAMRADALDALVLVREGAPLASALA----QKKRFPGLVSMFARLGEQTGT 354
           L   ++ + N  M     D +V +R G     ++     Q + F  LV     +GE+TG 
Sbjct: 290 LSLVADAVDNAYMH----DRIVAMRRGIESGESMLRVSNQSQLFTPLVLQMVAVGEETGQ 345

Query: 355 LPLMLQRAANQLGAEVQRRAMHLATILEPLLIVAMGGVVMLIVLAVMLPIIQLNQFVK 412
           +  +L  AA+    EV     +L   LEP+LI  +  +V+++ L + LP+  +   VK
Sbjct: 346 IDQLLNDAADFYEGEVDYDLKNLTAKLEPILIGIVAVIVLILALGIYLPMWDMLNVVK 403