Pairwise Alignments

Query, 428 a.a., Putative diheme cytochrome c-553 from Variovorax sp. SCN45

Subject, 513 a.a., cytochrome c oxidase, subunit II (RefSeq) from Shewanella sp. ANA-3

 Score = 59.7 bits (143), Expect = 2e-13
 Identities = 43/124 (34%), Positives = 56/124 (45%), Gaps = 15/124 (12%)

Query: 304 DVPKTE-EPAGT----KAPIRRDAGTMARGAKIYDQRCAYCHGDQGQGAVGAYPPLAGNR 358
           D PKT  EP  +      P       MA G K Y   CA CH   G G   A+P LAG+ 
Sbjct: 391 DAPKTATEPTASVDPASLPTLSHDELMAEGEKTYATICAACHQLTGAGMPPAFPALAGS- 449

Query: 359 AVNMARPTNLVQVIAHGGFLPTTAGNPRPYGMPPFGQTLDAADVAAVLTYIRGSWGNDSA 418
           A+      N + ++ HG   P TA       M  FG  L    +AA++TY R +WGN++ 
Sbjct: 450 AIATGPIANHIDIVMHG--KPGTA-------MQAFGTQLTPQQLAAIITYERNAWGNNTG 500

Query: 419 PVTQ 422
              Q
Sbjct: 501 DTVQ 504



 Score = 54.3 bits (129), Expect = 9e-12
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 10/98 (10%)

Query: 325 MARGAKIYDQRCAYCHGDQGQGAVGAYPPLAGNRAVNMARPTNLVQVIAHGGFLPTTAGN 384
           M +G ++Y   CA CH   G+G  G +P L G+         +L +++ +G      AG 
Sbjct: 277 MTQGEQVYLGHCAACHQPNGEGLQGVFPHLKGSPIATGPLSGHL-EIVLNG-----KAGT 330

Query: 385 PRPYGMPPFGQTLDAADVAAVLTYIRGSWGNDSAPVTQ 422
                M  FG+ L   ++AAV+TY R +WGN++    Q
Sbjct: 331 ----AMQAFGKQLTTQEIAAVITYERNAWGNNTGDAVQ 364