Pairwise Alignments

Query, 1038 a.a., RND efflux system, inner membrane transporter from Variovorax sp. SCN45

Subject, 1065 a.a., NolG efflux transporter from Sinorhizobium meliloti 1021

 Score =  560 bits (1444), Expect = e-163
 Identities = 357/1060 (33%), Positives = 575/1060 (54%), Gaps = 46/1060 (4%)

Query: 7    SIRNPIPAVMLFVLLTFGGLLSFNAMKVQNFPDIDLPTVTVSASLPGAAPSQLETDVARK 66
            SI +P+ A M+ V++   GL S+  + V ++P+ DLP V V+ +  GA+P  +E++++R 
Sbjct: 7    SINHPVFATMMMVMILVLGLFSYGRLGVDHYPETDLPVVVVATTYTGASPESVESEISRP 66

Query: 67   LENSIATVQGLKHITTKVQDGAATLIVEFRLEKPVQEAVDDVRSAVQRVRADLPADVRDP 126
            +E ++ T+ G+  IT++  +G + ++V+F ++   Q+A  +VR  V R+    P  V  P
Sbjct: 67   IEAALNTIGGIDTITSESYEGRSIVVVQFEVDVDSQDAAQEVRDRVARLETKFPDGVATP 126

Query: 127  VVTKLDLAGQPVLAFTIASSQMDNEALSWYVDNDVTKRLLALPGVGAVNRVGGATRQVHV 186
             VT+    GQ +L+  ++S+      ++      +  RL  + GVG V+ +G + RQV V
Sbjct: 127  QVTRYKPEGQAILSVAVSSTSRTLPEITTLATRVINNRLSVISGVGQVSLIGSSERQVLV 186

Query: 187  DLDPVKLQALGASAGDISRQLRQVQTESAGGRFDLGGSEQPVRTMATVKSADQLADMQIV 246
             +DP +L A G +   +   +R    + A G    G +++ V     + +      + + 
Sbjct: 187  VVDPDRLGAYGLAVSTVIEAIRGENQDRAAGTLISGINQRIVTVEGRIANTSGFNRIIVA 246

Query: 247  LTDGRRIRLDQVARISDTIAEPRAAALLNGKPVVGFEVARSRGASEVEVGHAVQKALADM 306
              +G  + L +VA I DT AE  + A   G+  +G  + + +GA+ VEV  AV++ ++ +
Sbjct: 247  QRNGYPVYLSEVATILDTGAEVTSLANYQGQTTLGLHIVKVQGANTVEVASAVRREVSAL 306

Query: 307  RAQ--RPDIELTEAFNFVDPVEEEYNGSLHLLYEGAILAVVVVWLFLRDWRATFVSAVAL 364
             A+  + +++LT   +   P+  + +     L EG +L+V++V++FL  WR+T ++ + L
Sbjct: 307  NAELTKDNVQLTITRDNSRPIASQVSQVQRTLVEGGVLSVLIVFIFLNSWRSTVITGLTL 366

Query: 365  PMSVIPAFIGMHLLGFSVNVISLLALSLVVGILVDDAIVEVENIVRHLRMGKTPYQAAME 424
            P+SVI  F  ++ LGF++N+++L+ALSL +GIL+DDAIV  ENI RHL+MGK P +AA++
Sbjct: 367  PISVIGTFAAIYALGFTLNIMTLMALSLSIGILIDDAIVVRENITRHLQMGKDPVRAALD 426

Query: 425  AADEIGLAVIATTFTLIAVFLPTAFMSGIAGKFFKQFGWTAALAVFASLVVARVLTPMMA 484
              +EIGLAV++TT  ++AVFLP AFM G+ G+FF QFG T A+AV  SL V+  L PM++
Sbjct: 427  GTNEIGLAVLSTTLCIVAVFLPVAFMGGLIGRFFLQFGVTVAVAVVISLFVSFTLDPMLS 486

Query: 485  AYMLKPVVTAETEPGWL--------RWY------MRAVEWSTHNRFKTMVLATL-FFFGS 529
            +    P      + G+         +W+       R+V + T +  KT +   L  F  S
Sbjct: 487  SVWCDPQSQKTAKRGFFGQLIERFDQWFEGLASRYRSVIYFTFDYRKTTIAIVLGMFVVS 546

Query: 530  LAMIPLLKTGFIPPDDNSQTQVYLSLAPGSTLAQTTAAAEETRRRVMQIPHVKSVYTTVA 589
            L ++P + T F+PP D  +  + L    G++L    A   +  R + +  +V S Y+T+ 
Sbjct: 547  LLLVPRIGTEFLPPPDQGEVSISLEANEGASLDYMAAKVGQIERALREFNYVSSTYSTIN 606

Query: 590  GGSAGGDPFASFGTPETRKATLTIKLDPRGDRPRKQV-IENQIRSALETLPGVRSTVG-- 646
             G   G            KA + ++L     R  K       IR  L  + G+  +VG  
Sbjct: 607  SGEMRG----------FNKALVAVQLVHSSQRRLKTAETLGPIRRRLSRIAGLEISVGQR 656

Query: 647  --LGGSGEKYILALTGEDPVALASAASAVEKDLRTIPGLGNITSTASLVRPEIAVRPDFA 704
              + GS +   L++ G+    L   +  +   L  IPG   I S+   +RP +AVR    
Sbjct: 657  SEVVGSIKPLQLSILGDGDEELRRISDHITSVLAAIPGATEIESSIEKLRPTLAVRVRRE 716

Query: 705  RAADLGVTSSAIAETLRVATLGDYDQSLAKLNLAQRQV-PIVVKLEDSARQDIDLLGRLS 763
             A+DLGV+ + I +TLR    GD   +++  N    +   +VV+L  + R++   L  L 
Sbjct: 717  AASDLGVSIATIGDTLRSLVAGD---AISVWNSPDGETHDVVVRLPAAGRENAAQLRNLP 773

Query: 764  VPGTRGP-------VMLNQVASLSMEGGPAVIDRYDRSRNVNFEIELSGVGLGDAKAAVQ 816
            +   R         V+L+QVA +     PA I R D SR++     + G  LGD  A ++
Sbjct: 774  IATARMDDNGKPIMVLLDQVADVVESTAPAQITRKDLSRDIRISSNIEGRTLGDVVADLK 833

Query: 817  KLPSIQKLPPGVRIAEVGDAEVMTELFASFGLAMLTGVLCIYIVLVLLFKDFLHPVTILC 876
               +   +P G RI+  GDAE +TE  A    ++   V+ IYI+L   F  F+ P+ I+ 
Sbjct: 834  AAMTKMDIPVGFRISFGGDAENLTESTAYALQSLAMAVIFIYIILASQFGSFIQPIAIIM 893

Query: 877  ALPLALGGAFVGLLIGQKALSMPSLIGLIMLMGIATKNSILLVEYAIVARRDHGMSRWDA 936
             +PL+L G  +GLL     L+M S+IG++MLMG+ TKN+ILLV+Y+ +  R+ G S   +
Sbjct: 894  TMPLSLMGVLLGLLFTGSTLNMFSMIGIMMLMGLVTKNAILLVDYSNLGVRE-GKSLRQS 952

Query: 937  LRDACHKRARPIIMTTLAMGAGMLPIAVGFGSADSSFRSPMAMAVIGGLITSTVLSLLVV 996
            L DA   R RPI+MTTLAM  GMLP A+G G   +  R+PMA A+IGGLI+ST+LSL+ V
Sbjct: 953  LADAGAVRLRPIVMTTLAMIFGMLPTALGLGEGGAQ-RAPMAHAIIGGLISSTLLSLVFV 1011

Query: 997  PAVFTYVDDIEHWIRRTVRKLRGQPAD-PHIDDDLVETPA 1035
            P V TY+D     +RR V    G  A   H   D  +TPA
Sbjct: 1012 PVVLTYLDAFAGRVRRWVPSPTGSNASAQHDGSDKTKTPA 1051