Pairwise Alignments

Query, 673 a.a., Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 from Variovorax sp. SCN45

Subject, 599 a.a., lipid A export ATP-binding/permease protein MsbA from Phaeobacter inhibens DSM 17395

 Score =  322 bits (825), Expect = 3e-92
 Identities = 206/601 (34%), Positives = 328/601 (54%), Gaps = 27/601 (4%)

Query: 54  ADAERQSPPSTWVLLRLGRFAKPYRKQLILGFVLTLISTAATLVPPYLTIPLMDDILIPF 113
           AD ER+      VL  L  F +PYR       VL  ++T A ++   L++ L      P 
Sbjct: 10  ADVEREKSRKVGVLSALWPFMRPYR-------VLMAMATLALVLTAGLSLTL------PL 56

Query: 114 QNGQKIDTMRVG-------LYLGGLLVAALVGWGLGWARTYLLALVSERIGADLRTTTYE 166
              + +D  R+         +   L++AAL+  G G  R  L+  + ER+ AD+R   ++
Sbjct: 57  AVRRVVDNFRISEAALLNQYFAAALVIAALLAVGTG-LRYALVTRLGERVVADIRKAVFD 115

Query: 167 HLLTLPLDYFGGKRTGDLMARIGSETDRINVFLSLHALDFANDVLMIVMTAVILISINPL 226
            ++ +   +F    TG++++RI ++T  I   L         ++L+ +   V+++  +  
Sbjct: 116 RVIGMSPAFFEQIMTGEVLSRITTDTTLIQSVLGSSVSIALRNMLIFIGGLVLMLLTSAK 175

Query: 227 LAVVTLVPLPFIAWMIHVVRDRLRTGFEKIDRVWSEVTNVLA-DTIPGIRVVKAFAQERR 285
           L  + L+ +P +   I V+  RLR    + ++ W   ++  A + +  ++ V+A+  E  
Sbjct: 176 LTSLVLLIVPAVIVPILVLGRRLRK-ISRENQDWIAASSGNAGEALGAVQTVQAYTHEVA 234

Query: 286 EAERFRVANAYNLQVNDKLNRTWSLFTPTVSLLTEIGLLVVWAFGIWQVARGSITVGVLT 345
               F         V+ +  +T +  T  V  L   G++ V   G   V  G ++ G L 
Sbjct: 235 SRSEFSRLTETAFDVSMRRIQTRAFLTVIVIFLVFSGVVGVLWMGANDVRAGIMSEGTLV 294

Query: 346 AFIAYIGRFYTRLDSMSRIVSVTQKAAAGAKRIFDILDHVSNVPEPANPVKVER-VQGRI 404
            F+ Y       + ++S I S  Q+AA   +R+ ++L  V  V +P  P  +   V+G I
Sbjct: 295 QFVIYAVLVAGSVAALSEIWSELQRAAGATERLVELLTAVDQVQDPYAPRALAAPVRGEI 354

Query: 405 EMSGLGFRYGSRAVIH---DLDLVIEPGEMIGLVGHSGSGKSTLVNLICRFYDVTDGAIK 461
               + FRY +R  I    D+ L ++PGE +  VG SG+GK+T++ +I RFYD T GA+ 
Sbjct: 355 RFDDVSFRYPARPQIPALVDVSLTVQPGETVAFVGPSGAGKTTIIQMIQRFYDPTSGAVC 414

Query: 462 VDGTDIRRFAVADYRRHVGLVLQEPFLFFGTIAQNIAYGKPDATREEIVAAARAAHAHDF 521
           +DG  +R     D+R+H+ LV Q+P +F  +   NI +G+P A+  E+ AAARAA AHDF
Sbjct: 415 LDGRPLRDLQRDDFRQHIALVPQDPVIFALSARDNIRFGRPGASDAEVEAAARAAAAHDF 474

Query: 522 ILRLQHGYDSLVGERGQGLSGGERQRISIARALLIDPRILILDEATSAVDTETEKEIQKA 581
           I  L  GYDS VGERG  LSGG++QRI+IARA+L D  +L+LDEATSA+D E+E+ +Q A
Sbjct: 475 ISALPEGYDSQVGERGVMLSGGQKQRIAIARAILRDAPVLLLDEATSALDAESERLVQAA 534

Query: 582 LDNLVQGRTTIAIAHRLSTLRKADRLVVMDRGEVVEVGPHDALMAKQGAYWRLYQAQLRQ 641
           +D L QGRTT+ +AHRL+T++KADR+VVM+ G ++  G HD L+A+ G Y RL + Q   
Sbjct: 535 VDELSQGRTTLIVAHRLATVKKADRIVVMEEGRIIATGTHDQLVAEDGLYARLARLQFTD 594

Query: 642 G 642
           G
Sbjct: 595 G 595