Pairwise Alignments

Query, 345 a.a., Galactofuranose ABC transporter, permease protein 2 from Variovorax sp. SCN45

Subject, 333 a.a., ribose ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score =  167 bits (422), Expect = 5e-46
 Identities = 111/321 (34%), Positives = 169/321 (52%), Gaps = 24/321 (7%)

Query: 25  KRGLNPKYLPLAATISLFVLVATLGSVFYDGFFSAQVFLNLLIDNAFLIVVAVGMTFVIL 84
           K+ L+ ++L    ++   + +  + S     FF+    LN+L   +   ++AVGMT VIL
Sbjct: 21  KKLLSKEWLIEQKSLIALLFLVVVVSFLNPNFFTVDNLLNILRQTSVNAIIAVGMTLVIL 80

Query: 85  SGGIDLSVGSVIALTTMVSASLVEKHGWSPGVVIPLVLVMGTAFGAFMGLLIERYRLQPF 144
           + GIDLSVGSV+AL    +A+LV        V +P  L+ G A GA  G++I + ++Q F
Sbjct: 81  TAGIDLSVGSVLALCGAFAATLVAMEV-PVLVAVPTALLAGAALGAISGIIIAKGKVQAF 139

Query: 145 IVTLAGMFLARGLCYLISIDSISITNEFYSEVSQ-----------IRIPIWGEASVSISA 193
           I TL  M L RG+  ++  D   I+  F                 I +P+W         
Sbjct: 140 IATLVTMTLLRGVT-MVYTDGRPISTGFTDTADTFAWFGTGYTLGIPVPVW--------- 189

Query: 194 VIAVAVLLAAVFIAHCTPFGRAVYAIGGSEHSAVLMGLPVRRTLIGVYTLSGFCSALAGV 253
            + V V   A ++ + T FGR VYA+GG+E +  L G+ V R  IGVY + G  +ALAG+
Sbjct: 190 -LMVVVFAGAWYLLNHTRFGRYVYAVGGNESATRLSGINVDRVKIGVYAICGLLAALAGI 248

Query: 254 IFTFYMLSGYGLHAVGLELDAIAAVVIGGTLLTGGVGYVAGTLFGVLMLGIIQTLISFDG 313
           I T  + S      +G ELDAIAAVV+GGT L GG G + GTL G L++G +   ++   
Sbjct: 249 IVTSRLSSAQPTAGMGYELDAIAAVVLGGTSLMGGKGRIMGTLIGALIIGFLNNALNL-L 307

Query: 314 TLSSWWTRIVVGALLFVFCLL 334
            +SS++  I    ++ +  L+
Sbjct: 308 DVSSYYQMIAKAVVILLAVLV 328