Pairwise Alignments

Query, 504 a.a., Galactofuranose ABC transporter, ATP-binding protein from Variovorax sp. SCN45

Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056

 Score =  376 bits (965), Expect = e-108
 Identities = 207/492 (42%), Positives = 304/492 (61%), Gaps = 9/492 (1%)

Query: 5   QPVLALKGIHKQFGGIPVLRDVQLRLYAGEIHALMGQNGAGKSTLIKVLTGVLPSSGGEM 64
           Q +LAL  I K F G+  L    L +Y G + ALMG+NGAGKSTL+KVLTG+     G +
Sbjct: 3   QAILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSI 62

Query: 65  LLDGQPIRPASPLEAQKLGISTVYQEVNLCPNLSVAENVFAGRYPRCGVAQGFRIDWAGV 124
              GQP+    P ++Q  GIS ++QE+NL P L++AEN+F GR          RI W  +
Sbjct: 63  EYQGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFG---RILWDEM 119

Query: 125 NRRAEELLARIGLDIDVTRLLSSYSVAVQQMVAIARALGVSSKVLILDEPTSSLDDDEVE 184
           +R+A++LLAR+ +      LL   S+  QQMV IA+AL   SKV+I+DEPT +L D E E
Sbjct: 120 HRKADQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETE 179

Query: 185 KLFEVLRRLRGEGLAIVFVTHFLNQMYAVSDRITVLRNGGWIGEWKAAELGPQALIAAML 244
            LF V+  LR +G  IV+++H L +++ + D ITVLR+G +IGE +  +     LI  M+
Sbjct: 180 SLFNVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNEDGLIEMMV 239

Query: 245 GRELAAQSARPAALPAFDEAAPALLQAEGLGQAGQLQATDLRVRAGEVVGIAGLLGAGRT 304
           GR+L  Q  R AA     +     L+  GL  +G +      ++ GE++G++GL+GAGRT
Sbjct: 240 GRKLEEQYPRIAA-----QQGDISLEVIGLTGSG-VHDVSFTLKKGEILGVSGLMGAGRT 293

Query: 305 ELARLLFGLETPDRGVLKVDGRSVSFSNPADAIREGLALCPEERKTDGIVSELSVRENIA 364
           EL ++++G    +RGV+ ++GR+V+  +P D +  G+A   E+RK DG+V  LSV+EN++
Sbjct: 294 ELMKVIYGALPSERGVINLNGRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMS 353

Query: 365 LALQARLGTKRFLSHAEQTEMAQRFVKSLGIKTASVETPIGLLSGGNQQKAMIARWLATE 424
           L    +L     + HA++      F++   IKT S E  IG LSGGNQQK  IA+ L T+
Sbjct: 354 LCALDQLSKGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTK 413

Query: 425 PRVLILDEPTRGIDVAAKQEIMEEILRLAKAGMAVIFISSEMSEVVRVAHRIVVLRDRKK 484
           P+VLILDEPTRG+DV AK+EI + I +    GM++I +SSEM EV+ ++ RI+V+ + + 
Sbjct: 414 PKVLILDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRI 473

Query: 485 VGELPGGATEDE 496
            GE      + E
Sbjct: 474 SGEFMASEADQE 485



 Score =  108 bits (269), Expect = 6e-28
 Identities = 71/231 (30%), Positives = 125/231 (54%), Gaps = 6/231 (2%)

Query: 23  LRDVQLRLYAGEIHALMGQNGAGKSTLIKVLTGVLPSSGGEMLLDGQPIRPASPLEAQKL 82
           + DV   L  GEI  + G  GAG++ L+KV+ G LPS  G + L+G+ + P SP +    
Sbjct: 269 VHDVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLNGRTVNPVSPQDGLAN 328

Query: 83  GISTVYQEVN---LCPNLSVAENVFAGRYPRCGVAQGFRIDWAGVNRRAEELLARIGLDI 139
           GI+ + ++     L   LSV EN+      +  +++G +I  A      ++ +    +  
Sbjct: 329 GIAYISEDRKGDGLVLGLSVKENMSLCALDQ--LSKGVQIRHADEVIAVDDFIRLFNIKT 386

Query: 140 DVT-RLLSSYSVAVQQMVAIARALGVSSKVLILDEPTSSLDDDEVEKLFEVLRRLRGEGL 198
               +++ + S   QQ VAIA+ L    KVLILDEPT  +D    +++++++ + + EG+
Sbjct: 387 PSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGM 446

Query: 199 AIVFVTHFLNQMYAVSDRITVLRNGGWIGEWKAAELGPQALIAAMLGRELA 249
           +I+ V+  + ++  +SDRI V+  G   GE+ A+E   + L+A  +GR  A
Sbjct: 447 SIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMACAVGRNPA 497