Pairwise Alignments

Query, 404 a.a., L-arabinose ABC transporter, permease protein AraH from Variovorax sp. SCN45

Subject, 453 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  221 bits (562), Expect = 4e-62
 Identities = 148/406 (36%), Positives = 212/406 (52%), Gaps = 44/406 (10%)

Query: 32  REYGMLISLVAIMVLFQVLT----DGTLLRPLNLTNLLLQNSYVVIMALGMLLVIVAGHI 87
           R  GM+ +L+ I + FQV+T    DG  L+P NL NL +Q S V +MA GM+LVIV  +I
Sbjct: 45  RLLGMVGALIIIWLGFQVMTGGLFDGLFLKPRNLWNLTVQTSSVAVMATGMVLVIVTRNI 104

Query: 88  DLSVGSVCGFIGALAAVLMVE---------YDWHFVPTAIVSILAGAVIGAAQGWFVAFR 138
           DLSVGSV GF G +  VL  +         +   +  T    I  G  IGA  G  +AF 
Sbjct: 105 DLSVGSVLGFCGMIMGVLQAQVLPQYLGLGHPATWAITLACGIAVGGAIGALHGSIIAFL 164

Query: 139 KIPSFIVTLAGMLVFKGLTLALLAGQSVGPFPVEFQRLSSGFIPDPLGGDTLRITSLAVG 198
            +P+FIVTL G+LV++G T  + +GQ+V P    F+ +  G       G      S  VG
Sbjct: 165 NVPAFIVTLGGLLVWRGATWFVTSGQTVAPMDATFRLMGGG-----TEGSIGATASWIVG 219

Query: 199 ALAAVALVFFKLRGRARLAAHGMETEPY--AFFL-------------VKNLFFAAIILFF 243
           +LA +A+V   L  R +    G    P    +FL             V N ++  + +  
Sbjct: 220 SLACIAIVGAILNSRKQRKRFGFPLRPVWAEYFLSILGCALVLGAVAVANHYYWPVNIAR 279

Query: 244 SYL-----------LSTYKGLPNVLVVMAVLIVVYDFVTNRTTIGRRIYALGGNEKAARL 292
            Y            L    G+   ++V  V+ +V  F+  R   GR ++ALGGN +AA L
Sbjct: 280 RYADANGIAWPDGGLQISHGIAIPVLVAIVVGIVMTFIATRLRFGRYVFALGGNPEAAEL 339

Query: 293 SGVKTQRLAFLTFVNMGALAALAGLVFAARLNTATPKAGLGFELDVIAACFIGGASASGG 352
           +G+KT+ +    F  MG L A+A  +  ARLN AT   G   EL  IAA  IGG S +GG
Sbjct: 340 AGIKTRWVTVKIFTLMGVLCAIAAAISTARLNAATNAQGELDELYTIAAAVIGGTSLAGG 399

Query: 353 VGRVMGAVIGAFIMGVMNNGMSILGIGIDYQQVIKGLVLLAAVFID 398
           VG + GA+IGA +M  + +GM +LGI   +Q+++ G+VL+ AV++D
Sbjct: 400 VGTIAGAMIGALVMQSLQSGMVLLGIDTPFQRIVVGVVLVTAVWLD 445