Pairwise Alignments

Query, 523 a.a., L-arabinose ABC transporter, ATP-binding protein AraG from Variovorax sp. SCN45

Subject, 506 a.a., L-arabinose ABC transporter, ATPase component (from data) from Sinorhizobium meliloti 1021

 Score =  651 bits (1679), Expect = 0.0
 Identities = 333/471 (70%), Positives = 384/471 (81%)

Query: 46  GENGAGKSTLMKVLSGVYPCDSYEGEIRFEGEVRRFRGIADSEKLGIIIIHQELALVPLL 105
           G+    KSTLMKVLSGVYP  +YEGEI ++GE+R+F  I+DSE+LGIIIIHQELALVPLL
Sbjct: 33  GKTAPAKSTLMKVLSGVYPAGTYEGEIHYDGELRQFSTISDSEELGIIIIHQELALVPLL 92

Query: 106 SIAENIFLGNEITRGGVIDWFAAYARTRELLAKVGLKEPPTTLVTDLGVGKQQLVEIAKA 165
           SIAENIFLGNE+   GVI W   +ART+ELL KVGL E P TL+TD+GVGKQQLVEIAKA
Sbjct: 93  SIAENIFLGNEVAEKGVIHWPQTFARTQELLKKVGLNESPATLITDIGVGKQQLVEIAKA 152

Query: 166 LAKEVKLLILDEPTASLNEKDSDALLMLLLELKRQGIASILISHKLNEIAKVADSVTVLR 225
           L+K+V+LLILDEPTASLNE DSDALL LL+E + QG+ SI+ISHKLNEI KVAD +T+LR
Sbjct: 153 LSKKVRLLILDEPTASLNENDSDALLKLLMEFRSQGMTSIIISHKLNEIKKVADQITILR 212

Query: 226 DGATVETMDCRAQPISEDRIIRGMVGRDMAHRYPQRAPKIGETVFEVRDWRVHHALHADR 285
           DG TVET+DC  + ISEDRII GMVGR M  RYP R PKIG+T+ EV++W V+H  H DR
Sbjct: 213 DGGTVETLDCHKEDISEDRIINGMVGRAMEDRYPPREPKIGDTLLEVKNWNVYHQHHRDR 272

Query: 286 EQIKGVSLNVRQGEIVGIAGLMGAGRTELAMSVFGRSYGQRISGSVLMHGKPVDVSTVRK 345
           + +  VS  VR GE+VGIAGLMGAGRTE AMSVFG+S+G +I+G V MHG+PVDVST+ K
Sbjct: 273 QFLHDVSFKVRAGEVVGIAGLMGAGRTETAMSVFGKSWGHKITGEVTMHGRPVDVSTIPK 332

Query: 346 AIDHGIAYVTEDRKGLGLVLEEDIRRNISLANLEAVSESAVIDTGREFKVANEYRKALNI 405
           AI  G+AYVTEDRK LGLVL  +I  N +LANL AV+ + VID  +E KVA EYR  L I
Sbjct: 333 AIKAGLAYVTEDRKQLGLVLINNIMHNTTLANLHAVASNGVIDERKERKVAAEYRSKLRI 392

Query: 406 RCSGVEQLVVNLSGGNQQKVVLSKWLFTKPELLILDEPTRGIDVGAKYEIYTIIDQLASE 465
           R   + Q  VNLSGGNQQKVVLSKWLFT PE+LILDEPTRGID+GAKYEIYTII+QLA+E
Sbjct: 393 RSHSIYQETVNLSGGNQQKVVLSKWLFTNPEVLILDEPTRGIDIGAKYEIYTIINQLAAE 452

Query: 466 GKGILMISSELPELLGMCDRIYVMNEGRFVAEFPVAEASQERIMHAIVSSG 516
           GKGILMISSE+PELLG CDRIYVMNEGR VAE    EASQE IM AI+ SG
Sbjct: 453 GKGILMISSEMPELLGTCDRIYVMNEGRMVAELSKEEASQESIMRAIMRSG 503



 Score = 67.4 bits (163), Expect = 1e-15
 Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 8/234 (3%)

Query: 29  LSNVNLGVRAGEIHAVVGENGAGKSTLMKVLSGVYPCDSYEGEIRFEGEVRRFRGIADSE 88
           L +V+  VRAGE+  + G  GAG++     + G        GE+   G       I  + 
Sbjct: 275 LHDVSFKVRAGEVVGIAGLMGAGRTETAMSVFGKSWGHKITGEVTMHGRPVDVSTIPKAI 334

Query: 89  KLGIIII---HQELALVPLLSIAENIFLGN--EITRGGVIDWFAAYARTRELLAKVGLKE 143
           K G+  +    ++L LV + +I  N  L N   +   GVID         E  +K+ ++ 
Sbjct: 335 KAGLAYVTEDRKQLGLVLINNIMHNTTLANLHAVASNGVIDERKERKVAAEYRSKLRIRS 394

Query: 144 PPTTLVT-DLGVGKQQLVEIAKALAKEVKLLILDEPTASLNEKDSDALLMLLLELKRQGI 202
                 T +L  G QQ V ++K L    ++LILDEPT  ++      +  ++ +L  +G 
Sbjct: 395 HSIYQETVNLSGGNQQKVVLSKWLFTNPEVLILDEPTRGIDIGAKYEIYTIINQLAAEGK 454

Query: 203 ASILISHKLNEIAKVADSVTVLRDGATVETMDCRAQPISEDRIIRGMVGRDMAH 256
             ++IS ++ E+    D + V+ +G  V  +    +  S++ I+R ++     H
Sbjct: 455 GILMISSEMPELLGTCDRIYVMNEGRMVAELS--KEEASQESIMRAIMRSGEKH 506