Pairwise Alignments

Query, 523 a.a., L-arabinose ABC transporter, ATP-binding protein AraG from Variovorax sp. SCN45

Subject, 526 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  400 bits (1029), Expect = e-116
 Identities = 240/501 (47%), Positives = 318/501 (63%), Gaps = 10/501 (1%)

Query: 13  ILEMRGITKTFPGVKALSNVNLGVRAGEIHAVVGENGAGKSTLMKVLSGVYPCDSYEGEI 72
           IL    I+K+F GV AL +V   +RAGEIHA++GENGAGKSTLMKVLSGVY    YEG +
Sbjct: 18  ILAAEAISKSFGGVAALKDVRFELRAGEIHALMGENGAGKSTLMKVLSGVYT--DYEGAV 75

Query: 73  RFEGEVRRFRGIADSEKLGIIIIHQELALVPLLSIAENIFLGNE-ITRGGVIDWFAAYAR 131
           R +GE  RF  + D+E  GI IIHQEL LVP L +A+NIFLG E +  G  +D  A+   
Sbjct: 76  RVDGETVRFSNVRDAEAAGIAIIHQELNLVPELGVADNIFLGRERVIAGLFVDRKASLEA 135

Query: 132 TRELLAKVGLKEPPTTLVTDLGVGKQQLVEIAKALAKEVKLLILDEPTASLNEKDSDALL 191
            R LL ++G++  P   V  L VG+QQLVEIAKAL+ E ++LI+DEPT++L+  +   L 
Sbjct: 136 ARGLLNRLGIELDPEARVGQLRVGEQQLVEIAKALSVEARILIMDEPTSALSPGECRRLF 195

Query: 192 MLLLELKRQGIASILISHKLNEIAKVADSVTVLRDGATVETMDCRAQPISEDRIIRGMVG 251
            ++ +L   G+  I ISH+++E+ +++D VTV RDG  V         + E+ II  MVG
Sbjct: 196 KIMRQLAADGVGIIYISHRIDEVMQLSDRVTVFRDGRHVWARPMAG--LDENTIIAAMVG 253

Query: 252 RDM--AHRYPQRAPKIGETVFEVRDWRVH-HALHADREQIKGVSLNVRQGEIVGIAGLMG 308
           R++  AHR   R    GE V  VRD  +     H  R+ +KGVS +VR GEI+GI GL+G
Sbjct: 254 RNLLDAHRR-DRGKGGGEPVLSVRDLSLAVSGRHGWRDVLKGVSFDVRAGEILGIGGLLG 312

Query: 309 AGRTELAMSVFGRSYGQRISGSVLMHGKPVDVSTVRKAIDHGIAYVTEDRKGLGLVLEED 368
           AGRTE+  ++F  + G R  G + + G  V++ + R A   G A VTEDRK  GL L E 
Sbjct: 313 AGRTEILETIFASNEGLR-GGEIRLDGIAVNIRSPRDARRLGFALVTEDRKAKGLHLHES 371

Query: 369 IRRNISLANLEAVSESAVIDTGREFKVANEYRKALNIRCSGVEQLVVNLSGGNQQKVVLS 428
           IR N++L  +  ++   +     E  +A     AL +RC+G  Q    LSGGNQQKVV+ 
Sbjct: 372 IRDNVALPLVGRLARFGLRSFEGERALAKGAVDALGVRCAGTGQAAGTLSGGNQQKVVIG 431

Query: 429 KWLFTKPELLILDEPTRGIDVGAKYEIYTIIDQLASEGKGILMISSELPELLGMCDRIYV 488
           KWL T P +L+LDEPTRGIDVGAK EIY +I +LA +G  I+++SSELPELL + DRI V
Sbjct: 432 KWLATGPRVLLLDEPTRGIDVGAKREIYDLIFKLAGDGLAIVVVSSELPELLLLADRILV 491

Query: 489 MNEGRFVAEFPVAEASQERIM 509
           M EGR        EAS+ERIM
Sbjct: 492 MAEGRQTGLISREEASEERIM 512



 Score = 94.7 bits (234), Expect = 7e-24
 Identities = 75/226 (33%), Positives = 111/226 (49%), Gaps = 7/226 (3%)

Query: 288 IKGVSLNVRQGEIVGIAGLMGAGRTELAMSVFGRSYGQRISGSVLMHGKPVDVSTVRKAI 347
           +K V   +R GEI  + G  GAG++ L M V    Y     G+V + G+ V  S VR A 
Sbjct: 34  LKDVRFELRAGEIHALMGENGAGKSTL-MKVLSGVYTD-YEGAVRVDGETVRFSNVRDAE 91

Query: 348 DHGIAYVTEDRKGLGLVLEEDIRRNISLANLEAVSESAVIDTGREFKVANEYRKALNIRC 407
             GIA + ++   L LV E  +  NI L   E V     +D     + A      L I  
Sbjct: 92  AAGIAIIHQE---LNLVPELGVADNIFLGR-ERVIAGLFVDRKASLEAARGLLNRLGIEL 147

Query: 408 SGVEQLVVNLSGGNQQKVVLSKWLFTKPELLILDEPTRGIDVGAKYEIYTIIDQLASEGK 467
              E  V  L  G QQ V ++K L  +  +LI+DEPT  +  G    ++ I+ QLA++G 
Sbjct: 148 DP-EARVGQLRVGEQQLVEIAKALSVEARILIMDEPTSALSPGECRRLFKIMRQLAADGV 206

Query: 468 GILMISSELPELLGMCDRIYVMNEGRFVAEFPVAEASQERIMHAIV 513
           GI+ IS  + E++ + DR+ V  +GR V   P+A   +  I+ A+V
Sbjct: 207 GIIYISHRIDEVMQLSDRVTVFRDGRHVWARPMAGLDENTIIAAMV 252