Pairwise Alignments

Query, 356 a.a., L-arabinose ABC transporter, substrate-binding protein AraF from Variovorax sp. SCN45

Subject, 324 a.a., galactose/glucose ABC transporter substrate-binding protein MglB from Vibrio cholerae E7946 ATCC 55056

 Score = 70.9 bits (172), Expect = 5e-17
 Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 30/272 (11%)

Query: 77  QIENMVTKGSKVLVIAAIDGTTLSDVLQKAADKGVKVIAYDRLIKGSKNVDY----YATF 132
           Q++ M+ +G + L I  +D      ++QKA    V V+ Y++         Y    Y   
Sbjct: 72  QVDVMLARGVQALAINLVDPAAAPTIIQKAKIDDVPVVFYNKEPSAEAMASYDKAFYVGT 131

Query: 133 DNFQVGVLQAQSIEAALGL-----KSGKGPFNIELFGGSPDDNNAFFFYNGAMSVLDPYI 187
           D+ + G++Q   I A         K+G G     +  G P   +A      ++  ++   
Sbjct: 132 DSKESGIIQGDLISAQWKANPAWDKNGDGVLQYVMLKGEPGHPDAEARTTYSVQTIND-- 189

Query: 188 KSGKLVVRSKQMGMDKVGTLRWDGAVAQARMDNLLSAYYTKDRVDAVLSPYDGLSIGILS 247
            +G   ++++++ MD   T  WD A+A+ +MD  LS      +++ V++  DG+++G + 
Sbjct: 190 -NG---IKTQELHMD---TGMWDTAMAKDKMDAWLSGP-NGSKIEVVIANNDGMAMGAIE 241

Query: 248 SLKGVGYGSGSQPMPVVSGQDAEVPSIKSILRKEQTSTVFKDTRELAKVTVSMVDAMLSG 307
           +L+G G     Q +PV  G DA   ++  I   +   TV  D +  AK T  +   + +G
Sbjct: 242 ALRGAG-----QKIPVF-GVDALAEALALIKSGDMAGTVLNDAQNQAKATFELARNLANG 295

Query: 308 KQPEVNDTKTYNNGIKVVPSYLLKPVSVDASN 339
           K        T  N +  VP      V VD +N
Sbjct: 296 KPAAEGTQWTIENKVVRVPY-----VGVDINN 322