Pairwise Alignments

Query, 356 a.a., L-arabinose ABC transporter, substrate-binding protein AraF from Variovorax sp. SCN45

Subject, 313 a.a., sugar ABC transporter from Sinorhizobium meliloti 1021

 Score = 62.8 bits (151), Expect = 1e-14
 Identities = 71/296 (23%), Positives = 121/296 (40%), Gaps = 24/296 (8%)

Query: 16  AVVGFTPLVHAQDKGLIAISMPTKSSARWIADGANMQKYFKDKGYKTDLQYADDDIPNQL 75
           AV+  +  V A    LIAI  P+  +  + A+    +   K+ GY+T +   DDD   Q 
Sbjct: 14  AVLAASSAVPAYAADLIAIITPSHDNPFFKAEAVGAEAKAKELGYETLVLVHDDDANKQS 73

Query: 76  AQIENMVTKGSKVLVIAAIDGTTLSDVLQKAADKGVKVIAYDRLIKGSKNVDYYATFDNF 135
             I+  + +G+K +++           +QKA D GV     DR I  +         +N+
Sbjct: 74  QLIDTAIGRGAKAIILDNAGSEASIAAVQKAKDAGVPSFLIDREINATGVAVSQIVSNNY 133

Query: 136 QVGVLQAQSIEAALGLKSGKGPFNIELFGGSPDDNNAFFFYNGAMSVLDPYIKSGKLVVR 195
           Q   L A+     +G +SG     +EL G    D NA     G   V+D Y         
Sbjct: 134 QGAQLGAEEFVKLMG-ESGN---YVELLGREA-DLNAGIRSKGYHDVIDEY--------- 179

Query: 196 SKQMGMDKVGTLRWDGAVAQARMDNLLSAYYTKDRVDAVLSPYDGLSIGILSSLKGVGYG 255
             +M M    +  W      ++M+ +L A      +  V+S  D +++G +++L+  G  
Sbjct: 180 -PEMKMVAQQSANWSQTEGYSKMETILQA---NPDIKGVISGNDTMAMGAIAALQAAG-- 233

Query: 256 SGSQPMPVVSGQDAEVPSIKSILRKEQTSTVFKDTRELAKVTVSMV-DAMLSGKQP 310
              +   +V G D       SI      +TV +     A++ V    + + +GK P
Sbjct: 234 ---RKDVIVVGFDGSNDVRDSIKSGGIKATVLQPAYAQAQMAVQQAHEYITTGKAP 286