Pairwise Alignments

Query, 321 a.a., Galactofuranose ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 334 a.a., Periplasmic binding protein/LacI transcriptional regulator (NCBI) from Rhodospirillum rubrum S1H

 Score = 89.4 bits (220), Expect = 1e-22
 Identities = 82/269 (30%), Positives = 132/269 (49%), Gaps = 11/269 (4%)

Query: 5   RRTLNTALAAAALGSMLPVSVFAQKKLVLGFAQVGAESEW-RTANTESIKSSAKDAGI-E 62
           ++ L TA AAAAL S          K  +     G ++E+ +       +  A  AGI E
Sbjct: 2   KKLLLTACAAAALLSASAAMAADAPKARIAVLMYGNKAEFVQLMERYGKEHPAVKAGIAE 61

Query: 63  LKFSDAQQKQENQIKAIRSYIAQKVDVIAFSPVVESGWETVLREAKAAKIPVVLTDRSVS 122
           + F D +     Q    +  I  K D I  +P+       +   AK A IPVV+T+  ++
Sbjct: 62  VTFYDGRYDAAVQNDQAQMAINTKQDAIVVNPMDYEANIDIATNAKMAGIPVVVTNARLN 121

Query: 123 TKDDSLYVTFMGSDFIEEGRKAGRWLVEKMKDQKGDVNIVELQGTVGSAPAIDRKKGFEE 182
           T + +  V    SD +  G    + ++ K+   KG+V I+E  G  G +  I R +G E+
Sbjct: 122 TDEMTAEVV---SDDVLGGYLEAKDVLTKL-GCKGNVVIIE--GPKGGSGEIQRGQGNEK 175

Query: 183 IIKADPK--FKIIRSQTGDFTRAKGKEVMEAFLKADGKKINVLFAHNDDMAIGAIQAIEE 240
            +   P    K++  +T +++RA+  ++M+ +L     KIN +   ND+MA+GAI+AI+ 
Sbjct: 176 ALAECPAGAVKVLERKTANWSRAEALDLMQNWLSKHPGKINGVIGQNDEMALGAIEAIKA 235

Query: 241 AGLKPAKDIVIISIDGVKGAFEAMIAGKL 269
           A L   KD  I  IDGV  A  A+ AG++
Sbjct: 236 ADLN-VKDFAIAGIDGVTDALHAVKAGEM 263