Pairwise Alignments

Query, 1586 a.a., FIG00732904: hypothetical protein from Variovorax sp. SCN45

Subject, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 89.0 bits (219), Expect = 1e-21
 Identities = 98/431 (22%), Positives = 178/431 (41%), Gaps = 29/431 (6%)

Query: 1146 VASDYRTLAVHESYSKPRADNWDRHLELPGLQHALAGAVVAHEVEG-LDAAFPLLQVQDP 1204
            V++D R +     +     + +D H        A+ G  VA  VE  LDA    L V D 
Sbjct: 27   VSTDSRAIPAEALFVALVGERFDAH---DFASQAVTGGAVALLVERELDAECSQLVVADT 83

Query: 1205 IAAMLALGAAARARYKGLLVGVTGTVGKSSTIAMLRDLLPERARVHTTIDNYNSRVGVPA 1264
              A+  LG+   A+ +   V +TG+ GK++   M+  +L ++ +V  T  N+N+ +GVP 
Sbjct: 84   KQALGQLGSWVHAQCQTPTVAITGSCGKTTVKEMVASILSQKGQVLYTQGNFNNDIGVPL 143

Query: 1265 MLANLAADTDVCILEMAQSGLWMERGPISLKARPHVAVITEIGLSQTRQASTLELTAEYK 1324
             L     + D  ++E+  + +  E    +   +P VA++  +  +      +++     K
Sbjct: 144  TLLRSTTEDDYAVIELGANHVG-EIAYTTALVKPDVALVNNVAAAHLEGFGSMDGVKRAK 202

Query: 1325 SRIFLGLEPGGVAIV------PDHIPCLQQVVQAAARTAGAIWVVGTGPEANIRIVDTQP 1378
              I+ GL+ G VAIV       D+   +  +     +T  A     T   A+    D + 
Sbjct: 203  GEIYQGLQAGAVAIVNLDSNGGDYWKAV--LADKTVKTFSA-----TDHNADFYPRDVRL 255

Query: 1379 EPGGGCRVRIAMAGRTVAYSFPLHSAGLVRNSALAFAALVAMGFDAEDACARMPHVRLPA 1438
               G     +      V     +     V N+  A A  + MG    +    + H+    
Sbjct: 256  NALGIASFTLVTPVGEVGVELGIMGQHNVANALAAAALSLEMGASLAEIGQGLAHLSKVK 315

Query: 1439 SVMQVHPLRTQAGVQATLIDDSWNAEVMSMRNAMEFVRGFQRAAQGPVVRKIGVLGRIVN 1498
              + +  LR       TLIDDS+NA V +M+ A+E +  F        VR + +LG +  
Sbjct: 316  GRVDMAQLRD----DITLIDDSYNASVPAMKAAVELLGSFS------AVRWL-ILGNMAE 364

Query: 1499 LDKDAEAMHRSLAAPLLQSGIAHVVTHGDEMRWLREEVPAELLGPHFDDASKLAGYLGGF 1558
            L  ++ A+H+ +       G   V+T+G + + + +         H D  + +  ++   
Sbjct: 365  LGDESLALHQQVGEHAAPFGFEFVLTYGKDAKVISDLCQGHHFATHQDMMTFIEQHIEQQ 424

Query: 1559 LRDGDLVLVKG 1569
                 ++LVKG
Sbjct: 425  QGRTQVLLVKG 435