Pairwise Alignments

Query, 241 a.a., Outer membrane protein W precursor from Variovorax sp. SCN45

Subject, 228 a.a., OmpW from Pseudomonas syringae pv. syringae B728a

 Score = 74.3 bits (181), Expect = 2e-18
 Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 17/236 (7%)

Query: 7   ALAALGALASGSAMAQQAGDWVIGTGWFHLSPQDSSKPLTVTSPVPAVLPGSGASVSDSD 66
           +L AL   A  +A A Q GD+++  G  H+ P + S  + +     A + G+ A+V   +
Sbjct: 9   SLVALALTAPVAAHAYQPGDFIVRAGVAHVQPNEDSGEVRLDG---AKVSGTKATVDGEN 65

Query: 67  TLGLNATYFLDSNWAVEGVFGVPPKFKLNGTGT-LGRVGQLGEARQWSPTILGKYFFNDA 125
            LGL   Y L  +  +E +   P    ++  G   G  G+L + +Q  PT+  +Y+  + 
Sbjct: 66  QLGLTFAYMLTQHVGIELLAATPFSHTVSVKGLGPGLDGKLADIKQLPPTLSLQYYPMEP 125

Query: 126 NSAFRPFVGLGATYVWYSDVKLTSNLQSALASQFGVSPFGVNTTAKLDSKFAPVLNAGVA 185
           +S F+P+ G+G  Y  + D  LT N +    S             KL          G+ 
Sbjct: 126 SSKFQPYAGVGINYTTFFDTDLTGNRKDQGFSNL-----------KLKDSVGLAGQLGMD 174

Query: 186 YQFDKHWGVSFSVSYIPLKTTAKLTTTSITGLPVATSQASLKLNPIVTYLAATYRF 241
           Y    +  ++ SV Y+ + T  K T    + L V  ++  + ++P V  +   Y+F
Sbjct: 175 YMITDNVLLNASVWYVDIDT--KATVDGPSALAVGKTKVDVDIDPWVYMVGVGYKF 228